Strain Fitness in Pseudomonas simiae WCS417 around PS417_05490

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
1,235,285	+				-2.2
1,235,285	+				+0.0
1,235,285	+				+0.5
1,235,511	+		PS417_05490	0.21	+0.8
1,235,512	-		PS417_05490	0.21	+0.4
1,235,512	-		PS417_05490	0.21	-1.2
1,235,524	-		PS417_05490	0.23	-0.8
1,235,577	+		PS417_05490	0.29	+0.6
1,235,577	+				+1.6
1,235,578	-		PS417_05490	0.29	+0.8
1,235,578	-		PS417_05490	0.29	+0.4
1,235,580	+		PS417_05490	0.29	-0.2
1,235,653	-		PS417_05490	0.37	+0.9
1,235,670	+		PS417_05490	0.39	-0.2
1,235,670	+		PS417_05490	0.39	-0.1
1,235,671	-		PS417_05490	0.39	+1.1
1,235,671	-		PS417_05490	0.39	+2.0
1,235,671	-		PS417_05490	0.39	-0.0
1,235,745	+		PS417_05490	0.48	-0.4
1,235,787	+		PS417_05490	0.53	+1.5
1,235,788	-		PS417_05490	0.53	-0.3
1,235,788	-		PS417_05490	0.53	+0.2
1,235,988	+		PS417_05490	0.76	+0.1
1,236,266	+				+0.4
1,236,269	-				-0.0
1,236,653	-		PS417_05495	0.52	-2.2
1,236,653	-		PS417_05495	0.52	+0.0
1,236,653	-		PS417_05495	0.52	+0.1
1,236,653	-		PS417_05495	0.52	+0.2
1,236,679	+		PS417_05495	0.55	-1.0
1,236,763	+		PS417_05495	0.66	-0.5
1,236,764	-		PS417_05495	0.66	-0.2
1,236,770	+		PS417_05495	0.67	-0.4
1,236,771	-		PS417_05495	0.67	-1.8
1,236,773	-		PS417_05495	0.67	+1.6
1,236,773	-		PS417_05495	0.67	-1.6
1,236,866	-		PS417_05495	0.79	+0.5
1,237,047	+				+0.3
1,237,047	+				+0.2
1,237,047	+				+1.3
1,237,111	-				-3.0