Strain Fitness in Pseudomonas simiae WCS417 around PS417_05285

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
1,169,803	+		PS417_05270	0.57	+1.0
1,169,803	+		PS417_05270	0.57	+1.3
1,169,803	+		PS417_05270	0.57	-1.2
1,169,804	-		PS417_05270	0.57	+0.3
1,169,804	-		PS417_05270	0.57	+0.3
1,169,804	-		PS417_05270	0.57	+1.6
1,169,804	-		PS417_05270	0.57	+0.8
1,169,804	-		PS417_05270	0.57	+0.6
1,169,807	+		PS417_05270	0.58	-0.4
1,169,807	+		PS417_05270	0.58	-0.7
1,169,808	-		PS417_05270	0.58	+0.9
1,169,808	-		PS417_05270	0.58	+0.6
1,170,131	+				-0.2
1,170,132	-				-1.0
1,170,428	-				+0.7
1,170,428	-				-0.7
1,170,489	+				-0.4
1,170,656	+		PS417_05285	0.14	-0.2
1,170,656	+		PS417_05285	0.14	+0.8
1,170,656	+		PS417_05285	0.14	-0.4
1,170,657	-		PS417_05285	0.14	+0.6
1,170,687	-		PS417_05285	0.17	-0.6
1,170,687	-		PS417_05285	0.17	+0.7
1,171,262	+		PS417_05285	0.76	+3.1
1,171,499	-				-0.3
1,171,511	+				+1.3
1,171,578	+				+0.2
1,171,578	+				+0.6
1,171,635	+		PS417_05290	0.12	-0.4
1,172,257	-		PS417_05290	0.65	-0.4
1,172,355	+		PS417_05290	0.74	+0.3
1,172,355	+		PS417_05290	0.74	-0.0
1,172,355	+		PS417_05290	0.74	+0.7
1,172,356	-		PS417_05290	0.74	+0.3
1,172,412	+		PS417_05290	0.79	-0.6
1,172,412	+		PS417_05290	0.79	+0.5
1,172,412	+		PS417_05290	0.79	-1.6
1,172,412	+		PS417_05290	0.79	+0.4
1,172,412	+		PS417_05290	0.79	-0.4
1,172,412	+		PS417_05290	0.79	+0.1
1,172,413	-		PS417_05290	0.79	+0.0
1,172,413	-		PS417_05290	0.79	-1.0