Strain Fitness in Pseudomonas simiae WCS417 around PS417_05240

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
1,160,035	-		PS417_05230	0.38	-0.1
1,160,044	+		PS417_05230	0.39	-0.8
1,160,044	+		PS417_05230	0.39	+0.1
1,160,044	+		PS417_05230	0.39	+0.2
1,160,044	+		PS417_05230	0.39	-0.4
1,160,167	+		PS417_05230	0.58	-0.0
1,160,395	+				-0.2
1,160,395	+				-0.6
1,160,441	+				+1.6
1,160,441	+				-0.4
1,160,606	+		PS417_05235	0.42	+0.5
1,160,607	-		PS417_05235	0.42	-0.1
1,161,019	+				-0.6
1,161,019	+				+0.1
1,161,020	-				-0.3
1,161,093	-				-2.1
1,161,410	+		PS417_05240	0.16	-1.3
1,161,410	+		PS417_05240	0.16	-0.8
1,161,410	+		PS417_05240	0.16	-1.5
1,161,411	-		PS417_05240	0.16	+0.6
1,161,417	-		PS417_05240	0.16	+0.2
1,161,487	-		PS417_05240	0.19	-0.7
1,161,712	+		PS417_05240	0.28	-1.5
1,161,732	-		PS417_05240	0.29	-0.4
1,161,855	+		PS417_05240	0.34	-1.1
1,161,856	-		PS417_05240	0.34	-0.3
1,161,857	+		PS417_05240	0.34	-0.9
1,161,858	-		PS417_05240	0.34	-0.4
1,161,883	-		PS417_05240	0.35	-1.0
1,161,971	+		PS417_05240	0.39	-0.3
1,162,146	-		PS417_05240	0.46	+1.4
1,162,206	-		PS417_05240	0.49	-1.5
1,162,239	+		PS417_05240	0.50	-1.4
1,162,310	+		PS417_05240	0.53	-1.3
1,162,311	-		PS417_05240	0.53	-0.7
1,162,311	-		PS417_05240	0.53	+0.4
1,162,311	-		PS417_05240	0.53	-0.5
1,162,311	-		PS417_05240	0.53	-0.6
1,162,411	-		PS417_05240	0.57	+0.3
1,162,421	+		PS417_05240	0.58	-2.0
1,162,422	-		PS417_05240	0.58	-0.1
1,162,458	-		PS417_05240	0.59	+0.1
1,162,883	+		PS417_05240	0.77	-0.6
1,162,884	-		PS417_05240	0.77	-0.6
1,162,884	-		PS417_05240	0.77	-1.1
1,163,321	+				-0.1
1,163,321	+				-0.1
1,163,322	-				+0.5
1,163,322	-				-0.2
1,163,322	-				-0.2
1,163,322	-				-0.7
1,163,418	-				-1.3
1,163,466	+				-0.0
1,163,466	+				-1.0
1,163,467	-				-0.4
1,163,467	-				-1.1
1,163,475	+				-0.4
1,163,519	-				+2.4
1,163,558	-				-1.0
1,163,613	-				-0.2
1,164,044	-		PS417_05245	0.51	-0.3