Strain Fitness in Pseudomonas simiae WCS417 around PS417_04845

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
1,074,876	+		PS417_04840	0.46	-0.8
1,074,876	+				+1.7
1,074,877	-		PS417_04840	0.46	+0.8
1,074,877	-				+2.7
1,074,900	-		PS417_04840	0.48	+1.7
1,074,900	-				-0.2
1,075,080	+		PS417_04840	0.60	-0.0
1,075,351	+				+0.1
1,075,462	+		PS417_04840	0.85	-0.3
1,075,462	+		PS417_04840	0.85	+0.1
1,075,472	-		PS417_04840	0.86	-0.3
1,075,502	+		PS417_04840	0.88	+0.3
1,075,550	+				-0.5
1,075,577	+				+0.6
1,075,577	+				+0.5
1,075,578	-				-0.4
1,075,578	-				+0.2
1,075,650	+				-0.2
1,075,651	-				+0.2
1,075,651	-				+1.4
1,075,651	-				+0.8
1,075,659	+				-0.2
1,075,670	+				-0.8
1,075,670	+				-0.8
1,075,670	+				+0.6
1,075,723	+				-0.4
1,075,755	+				+0.4
1,075,766	-				+0.7
1,076,017	-		PS417_04845	0.20	+0.7
1,076,017	-		PS417_04845	0.20	+0.7
1,076,168	+		PS417_04845	0.31	-0.8
1,076,301	+		PS417_04845	0.42	-0.0
1,076,301	+		PS417_04845	0.42	+0.4
1,076,302	-		PS417_04845	0.42	+0.6
1,076,302	-		PS417_04845	0.42	+0.9
1,076,304	+		PS417_04845	0.42	+0.7
1,076,568	+		PS417_04845	0.62	+0.8
1,076,568	+		PS417_04845	0.62	+0.1
1,076,569	-		PS417_04845	0.62	+0.6
1,076,778	+		PS417_04845	0.78	-0.0
1,076,985	-				-0.8
1,077,056	+				+0.5
1,077,057	-				-1.2
1,077,077	+				+0.1
1,077,078	-				+2.3
1,077,458	-				+1.0
1,077,674	-				+1.4
1,077,674	-				+0.8
1,077,714	+				-2.6
1,077,715	-				-1.9
1,077,878	+				+1.5
1,077,974	+				+0.6
1,078,067	+		PS417_04850	0.21	-0.0
1,078,068	-		PS417_04850	0.21	-0.4
1,078,068	-		PS417_04850	0.21	-0.1
1,078,068	-		PS417_04850	0.21	-1.0