Strain Fitness in Pseudomonas simiae WCS417 around PS417_27865
Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | R2A with Polymyxin B sulfate 0.002 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 6,005,740 | + | -1.0 | |||
| 6,005,741 | - | -0.0 | |||
| 6,005,938 | + | -0.4 | |||
| 6,005,955 | + | -0.6 | |||
| 6,005,956 | - | -1.1 | |||
| 6,005,956 | - | +0.6 | |||
| 6,006,305 | + | PS417_27865 | 0.40 | -0.5 | |
| 6,006,305 | + | PS417_27865 | 0.40 | -1.2 | |
| 6,006,306 | - | PS417_27865 | 0.40 | -2.8 | |
| 6,006,306 | - | PS417_27865 | 0.40 | -2.4 | |
| 6,006,857 | + | +0.8 | |||
| 6,006,857 | + | +0.8 | |||
| 6,006,857 | + | +1.7 | |||
| 6,007,246 | + | PS417_27870 | 0.18 | -2.4 | |
| 6,007,247 | - | PS417_27870 | 0.18 | -0.7 |
Or see this region's nucleotide sequence