Strain Fitness in Pseudomonas simiae WCS417 around PS417_26495

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
5,728,346	+		PS417_26490	0.12	-0.1
5,728,347	-		PS417_26490	0.12	+0.2
5,728,364	+		PS417_26490	0.14	+2.2
5,728,365	-		PS417_26490	0.14	-0.7
5,728,495	+		PS417_26490	0.28	-0.9
5,728,496	-		PS417_26490	0.29	-0.1
5,728,514	+		PS417_26490	0.31	-0.2
5,728,515	-		PS417_26490	0.31	+2.6
5,728,515	-		PS417_26490	0.31	-0.3
5,728,690	+		PS417_26490	0.50	-1.2
5,728,691	-		PS417_26490	0.51	-0.6
5,728,691	-		PS417_26490	0.51	+0.4
5,728,691	-		PS417_26490	0.51	-1.4
5,728,691	-		PS417_26490	0.51	+0.1
5,728,691	-		PS417_26490	0.51	+0.8
5,728,691	-		PS417_26490	0.51	-0.2
5,728,691	-		PS417_26490	0.51	-0.2
5,728,865	-		PS417_26490	0.70	+1.2
5,729,158	-				-1.7
5,729,161	+				-0.4
5,729,162	-				-0.4
5,729,202	+				-0.4
5,729,202	+				-1.6
5,729,202	+				+0.4
5,729,203	-				-0.5
5,729,284	-				+0.3
5,729,364	-				+1.6
5,729,372	+				+1.3
5,729,372	+				-0.5
5,729,373	-				-1.0
5,729,373	-				-0.4
5,729,413	-		PS417_26495	0.11	+0.4
5,729,413	-		PS417_26495	0.11	-0.7
5,729,453	-		PS417_26495	0.13	+0.2
5,729,453	-		PS417_26495	0.13	-0.3
5,729,926	+		PS417_26495	0.38	+4.1
5,729,926	+		PS417_26495	0.38	-0.3
5,729,927	-		PS417_26495	0.38	+1.2
5,729,927	-		PS417_26495	0.38	+0.0
5,730,224	-		PS417_26495	0.53	-1.1
5,730,448	+		PS417_26495	0.65	+0.5
5,730,448	+		PS417_26495	0.65	-0.2
5,730,449	-		PS417_26495	0.65	+1.6
5,730,481	+		PS417_26495	0.66	+2.3
5,730,482	-		PS417_26495	0.66	-0.1
5,730,869	-				-1.0
5,730,981	-				-0.4
5,731,233	+				+0.2
5,731,246	+				+0.0
5,731,273	-		PS417_26500	0.10	+0.3
5,731,372	+		PS417_26500	0.35	+0.3
5,731,373	-		PS417_26500	0.35	+1.7
5,731,373	-		PS417_26500	0.35	+0.7
5,731,488	+		PS417_26500	0.63	-1.0
5,731,488	+		PS417_26500	0.63	+0.8
5,731,488	+		PS417_26500	0.63	-0.3
5,731,489	-		PS417_26500	0.63	-0.6
5,731,489	-		PS417_26500	0.63	+0.0
5,731,489	-		PS417_26500	0.63	+0.8
5,731,610	+				-0.4
5,731,700	+				+0.1
5,731,710	+				-0.3
5,731,710	+				-0.4
5,731,711	-				+0.1
5,731,711	-				+0.2
5,731,711	-				-0.4
5,731,714	+				-0.2
5,731,714	+				+0.2
5,731,715	-				-0.1
5,731,715	-				-0.2
5,731,715	-				-1.6
5,731,739	-				-0.8
5,731,779	+				-0.0
5,731,946	-				-0.7