Strain Fitness in Pseudomonas simiae WCS417 around PS417_24945

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
5,405,499	+				-0.4
5,405,680	+				+0.4
5,405,821	+				-2.2
5,405,929	+				+0.2
5,405,929	+				-1.1
5,405,930	-				+1.3
5,405,932	+				+0.2
5,406,043	+				-0.2
5,406,044	-				-0.5
5,406,112	+				+0.1
5,406,172	-				-1.3
5,406,181	-				-0.5
5,406,218	+				-2.4
5,406,269	-				+0.8
5,406,398	-				-2.4
5,406,398	-				-0.9
5,406,450	-				+0.3
5,406,662	-		PS417_24945	0.28	-0.3
5,406,723	-		PS417_24945	0.37	-0.1
5,406,723	-		PS417_24945	0.37	-1.8
5,406,738	+		PS417_24945	0.39	-0.5
5,406,767	-		PS417_24945	0.43	-0.1
5,406,768	+		PS417_24945	0.43	-3.8
5,406,919	+		PS417_24945	0.65	+0.8
5,406,979	+		PS417_24945	0.73	-1.4
5,406,979	+		PS417_24945	0.73	-2.4
5,406,988	-		PS417_24945	0.75	-0.3
5,406,988	-		PS417_24945	0.75	-0.4
5,406,993	+				+2.6
5,406,993	+		PS417_24945	0.75	-2.6
5,406,993	+		PS417_24945	0.75	+0.1
5,406,994	-		PS417_24945	0.76	-1.7
5,406,994	-		PS417_24945	0.76	+0.9
5,406,994	-		PS417_24945	0.76	-0.2
5,407,202	-				+1.3
5,407,255	+				-0.6
5,407,256	-				-0.7
5,407,271	+				-0.3
5,407,412	-				+2.4
5,407,560	+				+0.1
5,407,560	+				-0.8
5,407,560	+				+0.6
5,407,560	+				+0.3
5,407,560	+				-1.4
5,407,561	-				-0.9
5,407,561	-				-0.2
5,407,561	-				-1.2
5,407,561	-				-1.7
5,407,561	-				-0.1
5,407,561	-				-1.0
5,407,624	+				-0.8
5,407,625	-				+0.7
5,407,625	-				+0.1
5,407,625	-				-0.6
5,407,671	-				+0.2
5,407,753	-				+1.8
5,407,765	+				+0.1
5,407,766	-				-0.4
5,407,766	-				-0.7
5,407,914	+		PS417_24950	0.12	+0.1
5,407,914	+		PS417_24950	0.12	-1.3
5,407,915	-		PS417_24950	0.12	+0.5
5,407,915	-		PS417_24950	0.12	-0.2
5,407,922	+		PS417_24950	0.12	-0.9
5,407,922	+		PS417_24950	0.12	+1.0
5,407,922	+		PS417_24950	0.12	-0.2
5,407,923	-		PS417_24950	0.12	-0.4
5,407,923	-		PS417_24950	0.12	+2.6
5,407,923	-		PS417_24950	0.12	-0.1
5,407,923	-		PS417_24950	0.12	-0.2
5,407,925	+		PS417_24950	0.12	+0.9
5,407,926	-		PS417_24950	0.12	-0.0
5,407,948	+		PS417_24950	0.13	-1.0
5,407,948	+		PS417_24950	0.13	+0.6
5,407,948	+		PS417_24950	0.13	-0.0
5,407,948	+		PS417_24950	0.13	-0.1
5,407,948	+		PS417_24950	0.13	-1.0
5,407,949	-				+0.8
5,407,949	-		PS417_24950	0.13	+0.2
5,407,998	+		PS417_24950	0.14	+0.6
5,407,998	+		PS417_24950	0.14	-0.8
5,407,999	-		PS417_24950	0.14	+0.4
5,408,064	+		PS417_24950	0.16	-0.0
5,408,064	+		PS417_24950	0.16	-1.0
5,408,065	-		PS417_24950	0.16	+1.8
5,408,100	+		PS417_24950	0.17	-0.4
5,408,100	+		PS417_24950	0.17	-1.2
5,408,100	+		PS417_24950	0.17	+0.8
5,408,101	-		PS417_24950	0.17	+0.3
5,408,101	-		PS417_24950	0.17	-0.3
5,408,101	-		PS417_24950	0.17	-1.3
5,408,101	-		PS417_24950	0.17	-0.2