Strain Fitness in Pseudomonas simiae WCS417 around PS417_23330

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
5,049,182	+		PS417_23325	0.79	-0.7
5,049,182	+		PS417_23325	0.79	+1.4
5,049,183	-		PS417_23325	0.79	-0.9
5,049,204	+		PS417_23325	0.80	-0.9
5,049,204	+		PS417_23325	0.80	-0.0
5,049,539	+				+0.3
5,049,539	+				-0.5
5,049,540	-				+0.2
5,049,540	-				+0.5
5,049,540	-				-0.2
5,049,553	+				-0.9
5,049,554	-				-0.2
5,049,682	+				-0.1
5,049,683	-				+0.7
5,049,693	+				-1.7
5,049,766	-				+0.4
5,049,780	-				-0.9
5,049,838	+				-0.2
5,049,839	-				-0.2
5,049,839	-				-0.1
5,049,857	+				-0.9
5,049,859	+				+0.0
5,049,860	-				-0.4
5,049,860	-				-0.2
5,049,882	+				-0.0
5,049,883	-				-0.4
5,049,924	+		PS417_23330	0.23	-1.0
5,049,924	+		PS417_23330	0.23	-1.7
5,050,074	+				-0.9
5,050,075	-		PS417_23330	0.74	-0.4
5,050,153	-				-1.3
5,050,153	-				+0.5
5,050,189	-				-0.5
5,050,391	+				-0.4
5,050,551	+		PS417_23335	0.16	-1.8
5,050,747	+		PS417_23335	0.26	+0.3
5,050,748	-		PS417_23335	0.26	+0.5
5,050,748	-		PS417_23335	0.26	-0.4
5,050,748	-		PS417_23335	0.26	-0.4
5,050,772	-		PS417_23335	0.27	+1.0
5,050,772	-		PS417_23335	0.27	+0.2
5,050,772	-		PS417_23335	0.27	-0.5
5,050,772	-		PS417_23335	0.27	+0.8
5,050,828	+		PS417_23335	0.30	+0.1
5,050,828	+		PS417_23335	0.30	+0.2
5,050,828	+		PS417_23335	0.30	-1.3
5,050,828	+		PS417_23335	0.30	-1.5
5,050,829	-		PS417_23335	0.30	-0.9
5,050,866	+		PS417_23335	0.32	-0.6
5,050,867	-		PS417_23335	0.32	-0.4
5,050,867	-				+1.2
5,050,867	-		PS417_23335	0.32	-0.6
5,050,867	-		PS417_23335	0.32	-0.2
5,050,869	+		PS417_23335	0.33	-0.4
5,051,010	+		PS417_23335	0.40	-0.4
5,051,011	-		PS417_23335	0.40	-0.7
5,051,011	-		PS417_23335	0.40	-0.5
5,051,113	+		PS417_23335	0.46	+0.3
5,051,113	+		PS417_23335	0.46	+0.4
5,051,113	+		PS417_23335	0.46	-1.2