Strain Fitness in Pseudomonas simiae WCS417 around PS417_21170

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
4,604,299	-				+0.1
4,604,299	-				-0.2
4,604,331	-				-0.3
4,604,434	-		PS417_21165	0.11	-1.3
4,604,660	+		PS417_21165	0.36	-2.1
4,604,860	+		PS417_21165	0.59	+0.3
4,604,868	-		PS417_21165	0.60	+0.4
4,604,868	-		PS417_21165	0.60	-0.6
4,604,868	-		PS417_21165	0.60	+0.8
4,605,211	+				+2.7
4,605,212	-				-0.4
4,605,215	+				+1.6
4,605,216	-				+0.4
4,605,424	+		PS417_21170	0.25	-1.3
4,605,511	+		PS417_21170	0.40	-0.8
4,605,512	-		PS417_21170	0.40	-2.3
4,605,512	-		PS417_21170	0.40	-0.9
4,605,514	+		PS417_21170	0.40	-0.6
4,605,586	+		PS417_21170	0.53	-0.4
4,605,587	-		PS417_21170	0.53	-0.6
4,605,587	-		PS417_21170	0.53	+0.5
4,605,607	+		PS417_21170	0.56	+1.1
4,605,762	+		PS417_21170	0.83	-1.9
4,605,763	-		PS417_21170	0.83	-0.9
4,605,909	+				+0.6
4,605,909	+				+1.1
4,605,910	-				-0.6
4,605,913	+				+1.9
4,605,913	+				-0.1
4,605,913	+				-0.1
4,605,913	+				+0.0
4,605,913	+				+0.4
4,605,913	+				+0.0
4,605,913	+				+0.3
4,605,914	-				+0.4
4,605,914	-				-0.1
4,605,914	-				+0.2
4,605,914	-				+0.1
4,605,936	+				-1.5
4,605,937	-				-0.6
4,605,973	+				+0.4
4,605,973	+				-0.9
4,606,223	-		PS417_21175	0.39	+0.6
4,606,231	+		PS417_21175	0.40	-0.1
4,606,241	-		PS417_21175	0.42	-0.4
4,606,248	-		PS417_21175	0.43	+0.4
4,606,323	+		PS417_21175	0.55	+1.4
4,606,323	+		PS417_21175	0.55	+0.9
4,606,324	-		PS417_21175	0.55	-0.9
4,606,440	+		PS417_21175	0.73	-0.8
4,606,440	+		PS417_21175	0.73	-0.2
4,606,440	+		PS417_21175	0.73	-0.2
4,606,443	+		PS417_21175	0.73	+0.5
4,606,444	-		PS417_21175	0.74	+0.3
4,606,444	-		PS417_21175	0.74	-0.4
4,606,444	-		PS417_21175	0.74	+0.3
4,606,448	+		PS417_21175	0.74	+0.5
4,606,501	+		PS417_21175	0.83	-0.4
4,606,501	+		PS417_21175	0.83	+0.5
4,606,501	+		PS417_21175	0.83	-0.9
4,606,501	+		PS417_21175	0.83	+1.4
4,606,502	-		PS417_21175	0.83	-0.2
4,606,502	-		PS417_21175	0.83	-0.0
4,606,609	-				-3.1
4,606,638	-				-0.8
4,606,648	+				-0.1
4,606,648	+				+1.6
4,606,648	+				-0.2
4,606,648	+				-0.3
4,606,648	+				+1.6
4,606,648	+				-0.5
4,606,648	+				+0.1
4,606,649	-				-0.2
4,606,649	-				-0.0
4,606,649	-				+1.1
4,606,649	-				-0.8
4,606,649	-				-1.1
4,606,708	+				-1.7
4,606,750	-				-0.1
4,606,751	+				-1.2
4,606,751	+				-0.0
4,606,797	-				-0.7
4,606,848	+				-0.1