Strain Fitness in Pseudomonas simiae WCS417 around PS417_20745

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
4,506,818	-		PS417_20735	0.84	-0.7
4,506,929	-				+0.1
4,506,929	-				-1.2
4,506,929	-				-0.4
4,506,935	-				+1.1
4,506,973	+				-0.4
4,507,075	-				+0.3
4,507,114	+				-0.1
4,507,260	+		PS417_20740	0.44	-1.5
4,507,260	+		PS417_20740	0.44	-1.4
4,507,261	-		PS417_20740	0.44	-0.7
4,507,261	-		PS417_20740	0.44	+0.3
4,507,261	-		PS417_20740	0.44	+0.1
4,507,261	-		PS417_20740	0.44	+0.4
4,507,267	-		PS417_20740	0.47	-1.7
4,507,267	-		PS417_20740	0.47	-0.2
4,507,267	-		PS417_20740	0.47	-1.5
4,507,267	-		PS417_20740	0.47	-0.1
4,507,405	+				-0.0
4,507,405	+				+1.2
4,507,406	-				+0.6
4,507,406	-				+0.2
4,507,425	+				+0.3
4,507,426	-				+0.4
4,507,426	-				-0.7
4,507,441	-				-0.1
4,507,515	+		PS417_20745	0.27	-0.6
4,507,515	+		PS417_20745	0.27	-1.5
4,507,516	-		PS417_20745	0.28	-0.4
4,507,607	+		PS417_20745	0.50	-0.0
4,507,607	+		PS417_20745	0.50	-1.8
4,507,607	+		PS417_20745	0.50	+0.6
4,507,607	+		PS417_20745	0.50	+0.1
4,507,608	-		PS417_20745	0.50	-0.3
4,507,608	-		PS417_20745	0.50	-1.1
4,507,728	-		PS417_20745	0.79	-0.5
4,507,728	-		PS417_20745	0.79	-1.0
4,507,728	-		PS417_20745	0.79	-0.4
4,507,730	+		PS417_20745	0.80	-2.1
4,507,731	-		PS417_20745	0.80	-2.3
4,507,731	-		PS417_20745	0.80	+0.6
4,507,838	+				+0.8
4,507,919	+				+0.2
4,507,933	+				-0.4
4,507,980	+				+1.1