Strain Fitness in Pseudomonas simiae WCS417 around PS417_19380

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
4,199,401	-		PS417_19375	0.37	+0.1
4,199,401	-		PS417_19375	0.37	-1.1
4,199,738	+		PS417_19375	0.75	-0.3
4,199,738	+		PS417_19375	0.75	+0.7
4,199,738	+		PS417_19375	0.75	-0.2
4,199,738	+		PS417_19375	0.75	-0.7
4,199,738	+		PS417_19375	0.75	+0.5
4,199,739	-		PS417_19375	0.75	+0.5
4,199,739	-		PS417_19375	0.75	-0.5
4,199,739	-		PS417_19375	0.75	-0.4
4,199,739	-		PS417_19375	0.75	+0.8
4,199,739	-		PS417_19375	0.75	-0.6
4,199,960	+				+1.6
4,199,961	-				-0.4
4,200,086	+				-1.4
4,200,087	-				-2.3
4,200,087	-				-0.1
4,200,087	-				-0.0
4,200,087	-				-0.7
4,200,176	+		PS417_19380	0.18	-2.8
4,200,177	-				+0.6
4,200,182	+		PS417_19380	0.19	+0.5
4,200,182	+		PS417_19380	0.19	-0.2
4,200,182	+		PS417_19380	0.19	+0.0
4,200,182	+		PS417_19380	0.19	+0.2
4,200,183	-		PS417_19380	0.19	-2.4
4,200,183	-		PS417_19380	0.19	+1.4
4,200,183	-		PS417_19380	0.19	-1.7
4,200,183	-		PS417_19380	0.19	-1.0
4,200,183	-		PS417_19380	0.19	-0.9
4,200,183	-		PS417_19380	0.19	-1.7
4,200,183	-		PS417_19380	0.19	-0.8
4,200,183	-		PS417_19380	0.19	-0.1
4,200,183	-		PS417_19380	0.19	+1.0
4,200,183	-		PS417_19380	0.19	+0.3
4,200,183	-		PS417_19380	0.19	-1.2
4,200,224	+		PS417_19380	0.26	+0.9
4,200,225	-		PS417_19380	0.26	-1.2
4,200,294	-		PS417_19380	0.38	-0.8
4,200,294	-		PS417_19380	0.38	+0.0
4,200,294	-				+1.6
4,200,356	+		PS417_19380	0.48	+0.4
4,200,357	-		PS417_19380	0.48	+0.5
4,200,357	-		PS417_19380	0.48	-0.6
4,200,357	-		PS417_19380	0.48	-1.9
4,200,371	+		PS417_19380	0.50	-0.4
4,200,629	+				-0.4
4,200,630	-				-0.7
4,200,647	+				-0.7
4,200,657	-				+1.0
4,200,657	-				+0.2
4,200,665	+				+2.5
4,200,665	+				-0.7
4,200,666	-				-0.8
4,200,908	+		PS417_19385	0.20	-0.2
4,200,909	-		PS417_19385	0.20	-0.1
4,201,026	+		PS417_19385	0.30	-0.1
4,201,026	+		PS417_19385	0.30	+1.9
4,201,191	+		PS417_19385	0.44	-0.9
4,201,378	-		PS417_19385	0.60	-0.0
4,201,452	-		PS417_19385	0.66	-1.0
4,201,452	-		PS417_19385	0.66	-0.2
4,201,503	+		PS417_19385	0.71	-1.3
4,201,504	-		PS417_19385	0.71	+0.2
4,201,545	+		PS417_19385	0.74	+0.0
4,201,546	-		PS417_19385	0.74	-1.2