Strain Fitness in Pseudomonas simiae WCS417 around PS417_18230

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
3,971,183	+				-0.1
3,971,237	-		PS417_18225	0.14	-1.1
3,971,266	+				+1.7
3,971,524	+		PS417_18225	0.47	-0.2
3,971,524	+				-0.3
3,971,524	+		PS417_18225	0.47	+0.9
3,971,524	+		PS417_18225	0.47	+0.4
3,971,524	+		PS417_18225	0.47	+0.2
3,971,524	+		PS417_18225	0.47	+0.2
3,971,525	-		PS417_18225	0.47	-2.5
3,971,525	-		PS417_18225	0.47	-3.5
3,971,529	-		PS417_18225	0.48	+0.8
3,971,605	+		PS417_18225	0.56	+0.8
3,971,605	+		PS417_18225	0.56	+0.2
3,971,743	+		PS417_18225	0.72	-0.1
3,971,758	-		PS417_18225	0.74	-1.1
3,971,842	-		PS417_18225	0.84	+1.3
3,972,271	-				-0.4
3,972,333	-		PS417_18230	0.11	-1.1
3,972,394	+				+2.3
3,972,788	-				-1.1
3,972,801	+		PS417_18230	0.42	+0.4
3,972,801	+		PS417_18230	0.42	-0.3
3,972,820	+		PS417_18230	0.43	-0.9
3,972,820	+		PS417_18230	0.43	-0.7
3,972,964	+		PS417_18230	0.52	-0.5
3,972,964	+		PS417_18230	0.52	-0.7
3,972,965	-		PS417_18230	0.52	-0.1
3,972,965	-		PS417_18230	0.52	-0.7
3,973,228	+		PS417_18230	0.70	-1.1
3,973,229	-		PS417_18230	0.70	-0.7
3,973,336	+		PS417_18230	0.77	-0.4
3,973,393	+		PS417_18230	0.81	-0.2
3,973,489	+		PS417_18230	0.87	-0.7
3,973,490	-		PS417_18230	0.87	-0.7
3,973,618	+				-0.4
3,973,733	-				-0.1
3,973,932	+		PS417_18235	0.29	+0.7
3,974,016	-		PS417_18235	0.43	-0.0
3,974,241	-		PS417_18235	0.81	-0.0
3,974,457	+				-0.9
3,974,477	+		PS417_18240	0.12	-2.6
3,974,477	+		PS417_18240	0.12	+1.6
3,974,507	-		PS417_18240	0.17	+0.5
3,974,615	-		PS417_18240	0.33	-0.2
3,974,623	+		PS417_18240	0.34	+0.3
3,974,623	+		PS417_18240	0.34	+0.0
3,974,624	-		PS417_18240	0.35	+0.3
3,974,624	-		PS417_18240	0.35	-0.2