Strain Fitness in Pseudomonas simiae WCS417 around PS417_15505

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
3,395,539	+				+0.8
3,395,540	-				-0.5
3,395,617	+				-1.2
3,395,632	+				-0.3
3,395,632	+				+0.5
3,395,718	+		PS417_15500	0.20	+0.2
3,395,774	+		PS417_15500	0.27	-1.1
3,395,854	+		PS417_15500	0.38	-0.3
3,395,854	+		PS417_15500	0.38	+0.3
3,395,854	+		PS417_15500	0.38	+1.2
3,395,855	-				+2.4
3,395,855	-		PS417_15500	0.38	-0.3
3,395,855	-		PS417_15500	0.38	+0.4
3,395,855	-		PS417_15500	0.38	-0.8
3,396,104	-		PS417_15500	0.70	+0.4
3,396,104	-		PS417_15500	0.70	-0.6
3,396,106	-		PS417_15500	0.71	+2.2
3,396,106	-		PS417_15500	0.71	-0.7
3,396,183	-		PS417_15500	0.81	-0.5
3,396,183	-		PS417_15500	0.81	-0.1
3,396,226	+		PS417_15500	0.86	+2.8
3,396,226	+		PS417_15500	0.86	+0.9
3,396,226	+		PS417_15500	0.86	-0.5
3,396,227	-		PS417_15500	0.86	-0.2
3,396,342	+				-0.2
3,396,427	+				-0.3
3,396,428	-				-0.7
3,396,428	-				-0.2
3,396,569	+		PS417_15505	0.11	-1.3
3,396,569	+		PS417_15505	0.11	-0.7
3,396,662	-		PS417_15505	0.22	-0.0
3,396,818	-		PS417_15505	0.39	-1.2
3,396,818	-		PS417_15505	0.39	-0.8
3,397,303	+				+0.1
3,397,303	+				-0.2
3,397,425	+				-1.1
3,397,425	+				+1.4
3,397,426	-				+1.4
3,397,502	-		PS417_15510	0.21	+0.7
3,397,656	+		PS417_15510	0.66	+0.9
3,397,751	+				+0.9
3,397,752	-				+2.3
3,397,752	-				+1.8
3,397,810	+				-0.3
3,398,227	-				+1.2