Strain Fitness in Pseudomonas simiae WCS417 around PS417_13215

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
2,888,569	-		PS417_13205	0.68	-1.3
2,888,569	-		PS417_13205	0.68	-0.5
2,889,645	+		PS417_13215	0.14	+0.2
2,889,645	+		PS417_13215	0.14	-0.0
2,889,645	+		PS417_13215	0.14	+0.6
2,889,841	+		PS417_13215	0.26	+0.9
2,889,841	+		PS417_13215	0.26	-0.3
2,889,842	-				-1.7
2,889,860	-		PS417_13215	0.28	+0.7
2,889,860	-		PS417_13215	0.28	+0.2
2,889,860	-		PS417_13215	0.28	+0.7
2,890,399	+		PS417_13215	0.61	+0.2
2,890,642	+		PS417_13215	0.76	+0.5
2,890,643	-		PS417_13215	0.76	+1.0
2,890,643	-				-1.4
2,891,003	+				-0.4
2,891,108	-		PS417_13220	0.13	+1.0
2,891,192	-				-1.0
2,891,782	-				-0.3
2,892,010	+		PS417_13225	0.25	+1.4