Strain Fitness in Pseudomonas simiae WCS417 around PS417_12060

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
2,618,279	+				-0.1
2,618,351	+		PS417_12055	0.14	+1.7
2,618,352	-		PS417_12055	0.14	+0.3
2,618,352	-		PS417_12055	0.14	-0.3
2,618,831	+		PS417_12055	0.62	+0.3
2,618,954	+		PS417_12055	0.74	-0.4
2,619,005	+		PS417_12055	0.79	-0.1
2,619,005	+		PS417_12055	0.79	-0.2
2,619,006	-		PS417_12055	0.79	-0.3
2,619,006	-		PS417_12055	0.79	+0.3
2,619,128	+				-1.7
2,619,128	+				+0.1
2,619,129	-				+2.3
2,619,129	-				+1.2
2,619,157	-				-0.1
2,619,218	-				-1.3
2,619,218	-				-1.1
2,619,237	+				-0.3
2,619,238	-				+1.7
2,619,321	+				-0.1
2,619,321	+				-0.3
2,619,322	-				-2.0
2,619,324	+				+1.5
2,619,324	+				-0.0
2,619,465	+		PS417_12060	0.22	-0.2
2,619,553	-		PS417_12060	0.31	-0.9
2,619,625	-		PS417_12060	0.39	-0.3
2,619,630	+				+0.3
2,619,631	-		PS417_12060	0.39	-0.7
2,619,631	-		PS417_12060	0.39	+0.3
2,620,017	+		PS417_12060	0.79	+0.4
2,620,017	+		PS417_12060	0.79	-2.1
2,620,017	+		PS417_12060	0.79	-1.3
2,620,017	+		PS417_12060	0.79	-1.8
2,620,017	+		PS417_12060	0.79	+0.0
2,620,018	-				-0.3
2,620,018	-		PS417_12060	0.79	-1.9
2,620,018	-		PS417_12060	0.79	-0.4
2,620,300	+				+0.0
2,620,802	+		PS417_12065	0.39	+0.3
2,620,847	+		PS417_12065	0.42	-0.3
2,620,847	+				+0.9
2,620,848	-		PS417_12065	0.42	-0.6
2,620,848	-		PS417_12065	0.42	+0.7
2,621,072	+		PS417_12065	0.57	-1.3
2,621,072	+		PS417_12065	0.57	+0.1
2,621,072	+		PS417_12065	0.57	-1.3
2,621,117	+		PS417_12065	0.60	-2.1
2,621,117	+		PS417_12065	0.60	-1.3
2,621,117	+				+0.4
2,621,117	+		PS417_12065	0.60	+0.3
2,621,118	-		PS417_12065	0.60	-2.6