Strain Fitness in Pseudomonas simiae WCS417 around PS417_11830

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
2,573,046	-				-4.2
2,573,046	-				+0.7
2,573,220	+				-1.1
2,573,398	-		PS417_11825	0.57	-2.2
2,573,609	+		PS417_11825	0.88	-1.6
2,573,610	-		PS417_11825	0.88	-0.6
2,573,610	-		PS417_11825	0.88	-3.7
2,573,683	+				-3.4
2,573,696	-				-0.9
2,573,699	-				-1.0
2,573,752	-				-1.2
2,573,994	+				-0.3
2,573,995	-				+2.0
2,573,995	-				+2.7
2,574,325	+		PS417_11830	0.33	-1.1
2,574,526	+		PS417_11830	0.55	-1.4
2,574,526	+		PS417_11830	0.55	-0.7
2,574,656	-		PS417_11830	0.69	+0.7
2,574,727	+		PS417_11830	0.77	-1.0
2,574,905	-				-0.5
2,574,905	-				-0.4
2,574,905	-				+1.2
2,574,905	-				+0.1
2,574,905	-				-0.2
2,574,905	-				+0.7
2,574,905	-				+0.0
2,575,071	+				-0.4
2,575,299	+		PS417_11835	0.20	-0.9
2,575,321	+		PS417_11835	0.22	+0.2
2,575,515	-		PS417_11835	0.38	+0.1
2,575,570	-		PS417_11835	0.43	+1.8
2,575,589	+		PS417_11835	0.44	-2.0
2,575,718	+		PS417_11835	0.55	+0.0
2,575,719	-		PS417_11835	0.55	-1.5
2,575,887	-		PS417_11835	0.69	-0.0