Strain Fitness in Pseudomonas simiae WCS417 around PS417_10635

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
2,268,456	-		PS417_10630	0.33	-1.0
2,268,528	+		PS417_10630	0.41	+0.1
2,268,529	-		PS417_10630	0.42	+0.1
2,268,532	-		PS417_10630	0.42	-0.5
2,268,555	+		PS417_10630	0.44	-0.1
2,268,676	+		PS417_10630	0.58	-0.1
2,268,676	+		PS417_10630	0.58	-0.2
2,268,676	+		PS417_10630	0.58	-0.6
2,268,676	+		PS417_10630	0.58	-0.8
2,268,676	+		PS417_10630	0.58	+0.1
2,268,677	-		PS417_10630	0.58	-0.4
2,268,677	-		PS417_10630	0.58	-0.0
2,268,677	-		PS417_10630	0.58	-0.6
2,268,719	-		PS417_10630	0.63	+0.8
2,268,719	-		PS417_10630	0.63	-0.5
2,268,754	+		PS417_10630	0.67	-0.8
2,268,779	+		PS417_10630	0.70	+1.2
2,268,780	-		PS417_10630	0.70	-2.4
2,268,806	-		PS417_10630	0.73	-0.3
2,268,882	-		PS417_10630	0.81	-0.8
2,269,061	+				+2.7
2,269,061	+				-0.8
2,269,061	+				-0.0
2,269,061	+				-0.5
2,269,061	+				-1.1
2,269,062	-				+0.1
2,269,062	-				+1.3
2,269,067	+				-0.9
2,269,070	-				-1.6
2,269,094	+				-1.1
2,269,096	+				+0.1
2,269,096	+				-0.7
2,269,116	-				+0.1
2,269,116	-				-1.1
2,269,147	+				-0.4
2,269,148	-				-1.3
2,269,161	+				+1.0
2,269,161	+				+0.5
2,269,176	+				+0.5
2,269,177	-				-0.6
2,269,228	+				-0.0
2,269,231	+				+0.4
2,269,231	+				+1.7
2,269,231	+				+0.1
2,269,232	-				+1.4
2,269,317	+				+0.4
2,269,317	+				+0.7
2,269,529	+		PS417_10635	0.24	-0.7
2,269,530	-		PS417_10635	0.25	-0.0
2,269,665	+		PS417_10635	0.64	-0.6
2,269,665	+		PS417_10635	0.64	-1.6
2,269,666	-		PS417_10635	0.64	-0.0
2,269,666	-		PS417_10635	0.64	-0.0
2,269,669	+		PS417_10635	0.65	-0.6
2,269,669	+		PS417_10635	0.65	-1.0
2,269,669	+		PS417_10635	0.65	-0.8
2,269,670	-		PS417_10635	0.65	-0.2
2,269,916	+				-0.3
2,269,917	-		PS417_10640	0.19	-1.3
2,270,012	+		PS417_10640	0.35	+0.8
2,270,012	+		PS417_10640	0.35	-0.1
2,270,013	-		PS417_10640	0.35	+0.5
2,270,262	-		PS417_10640	0.76	-0.4
2,270,271	+				+1.1
2,270,272	-		PS417_10640	0.78	+0.4
2,270,360	+				-0.6
2,270,360	+				-0.4
2,270,360	+				+1.2
2,270,361	-				+0.4
2,270,361	-				-0.1
2,270,457	-				-0.8
2,270,477	+				-0.1
2,270,478	-				+0.2
2,270,520	+				+0.7
2,270,520	+				+0.3
2,270,538	+				+0.2
2,270,538	+				+2.1
2,270,539	-				-0.7
2,270,710	+				+0.0
2,270,758	+				-0.6
2,270,761	-				+2.6