Strain Fitness in Pseudomonas simiae WCS417 around PS417_09345

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
2,026,794	+				+0.1
2,027,068	+		PS417_09340	0.28	+0.1
2,027,068	+		PS417_09340	0.28	-0.5
2,027,069	-		PS417_09340	0.28	-0.8
2,027,094	+		PS417_09340	0.31	-0.0
2,027,094	+		PS417_09340	0.31	-1.2
2,027,095	-		PS417_09340	0.31	-0.1
2,027,113	+		PS417_09340	0.33	-0.9
2,027,838	+				+0.5
2,028,144	+		PS417_09345	0.46	+0.8
2,028,144	+		PS417_09345	0.46	+0.2
2,028,198	+		PS417_09345	0.53	-0.2
2,028,199	-		PS417_09345	0.53	+0.4
2,028,295	-		PS417_09345	0.65	+1.6
2,028,295	-		PS417_09345	0.65	-0.4
2,028,516	-				+0.1
2,028,615	+				-0.1
2,028,742	+		PS417_09350	0.22	-0.2
2,028,743	-		PS417_09350	0.22	+1.3
2,028,943	+		PS417_09350	0.46	+0.2
2,028,944	-		PS417_09350	0.46	+0.0
2,028,944	-		PS417_09350	0.46	+0.9
2,028,944	-		PS417_09350	0.46	+1.2
2,028,947	+		PS417_09350	0.46	-1.4
2,028,947	+		PS417_09350	0.46	-0.1
2,028,947	+		PS417_09350	0.46	+0.1
2,028,947	+		PS417_09350	0.46	+0.1
2,028,948	-		PS417_09350	0.46	-0.2
2,028,948	-		PS417_09350	0.46	+1.5
2,028,949	+				+0.9
2,028,949	+		PS417_09350	0.46	-0.8
2,028,950	-		PS417_09350	0.46	+1.3
2,028,950	-		PS417_09350	0.46	-0.8
2,028,950	-		PS417_09350	0.46	-0.0
2,028,977	-		PS417_09350	0.50	+1.2
2,029,192	+		PS417_09350	0.75	-0.5
2,029,192	+		PS417_09350	0.75	-0.0
2,029,386	-				+0.3