Strain Fitness in Pseudomonas simiae WCS417 around PS417_09240

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
2,006,254	+		PS417_09230	0.77	+0.9
2,006,255	-		PS417_09230	0.77	-0.9
2,006,255	-		PS417_09230	0.77	+2.3
2,006,255	-		PS417_09230	0.77	-0.0
2,006,257	+		PS417_09230	0.78	+0.3
2,006,257	+		PS417_09230	0.78	+0.5
2,006,258	-		PS417_09230	0.78	+0.2
2,006,258	-		PS417_09230	0.78	-1.2
2,006,347	+		PS417_09230	0.82	-0.5
2,006,347	+		PS417_09230	0.82	+0.4
2,006,674	+				-0.3
2,006,675	-				-0.2
2,006,740	+				-0.2
2,007,039	+		PS417_09235	0.79	-3.8
2,007,114	+				+0.8
2,007,141	+				+0.1
2,007,270	+				-1.1
2,007,271	-				-1.4
2,008,135	+				-0.1
2,008,135	+				+0.0
2,008,136	-				+1.7
2,008,284	-				-0.5
2,008,348	+				-0.1
2,008,348	+				+0.2
2,008,970	-				+2.7
2,009,049	-		PS417_09245	0.76	+0.5
2,009,049	-		PS417_09245	0.76	+0.8
2,009,144	-		PS417_09245	0.87	-1.8