Strain Fitness in Pseudomonas simiae WCS417 around PS417_08505

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
1,857,439	-				+0.3
1,857,445	+		PS417_08500	0.12	-0.2
1,857,446	-				-1.1
1,857,446	-		PS417_08500	0.13	+1.7
1,857,446	-		PS417_08500	0.13	+0.2
1,857,446	-		PS417_08500	0.13	+1.0
1,857,630	-		PS417_08500	0.32	-0.0
1,857,630	-		PS417_08500	0.32	-1.3
1,857,748	+		PS417_08500	0.44	+1.4
1,857,749	-		PS417_08500	0.44	+0.2
1,857,835	-		PS417_08500	0.53	-0.6
1,858,351	-				-0.2
1,858,397	-				-0.6
1,858,397	-				-0.4
1,858,404	+				-0.6
1,858,404	+				-0.2
1,858,405	-				+0.8
1,858,405	-				+2.3
1,858,405	-				+0.9
1,858,405	-				-0.4
1,858,405	-				+0.0
1,858,697	+		PS417_08505	0.41	-1.0
1,858,725	+		PS417_08505	0.45	+0.8
1,858,834	+		PS417_08505	0.60	-1.7
1,859,072	-				-0.2
1,859,126	+				+0.5
1,859,126	+				-0.1
1,859,150	+				+0.5
1,859,150	+				-0.5
1,859,150	+				-0.5
1,859,150	+				+0.6
1,859,150	+				+0.6
1,859,151	-				+0.2
1,859,406	-		PS417_08510	0.33	-1.3
1,859,406	-		PS417_08510	0.33	+0.1
1,859,981	-				-0.2
1,859,999	+				+1.0
1,859,999	+				+0.0
1,860,031	+				-0.2
1,860,031	+				-0.1