Strain Fitness in Pseudomonas simiae WCS417 around PS417_07445

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
1,636,687	+				-0.8
1,636,687	+				-1.4
1,636,741	+				+2.7
1,636,999	-				+1.0
1,637,016	-				-1.5
1,637,056	+		PS417_07440	0.12	+0.1
1,637,061	-		PS417_07440	0.13	-0.3
1,637,192	+		PS417_07440	0.40	+0.8
1,637,368	-		PS417_07440	0.76	-1.9
1,637,450	+				-0.2
1,637,451	-				+0.2
1,637,543	+				+0.5
1,637,552	+				+0.5
1,637,552	+				-0.4
1,637,553	-				-0.5
1,637,596	+				-0.2
1,637,596	+				+0.5
1,637,596	+				-0.8
1,637,596	+				-0.6
1,637,596	+				+0.7
1,637,597	-				+0.2
1,637,597	-				+0.3
1,637,597	-				+0.0
1,637,597	-				+0.3
1,637,605	+				+1.0
1,637,605	+				-0.8
1,637,605	+				+0.0
1,637,748	-				+0.2
1,637,807	+		PS417_07445	0.13	-0.0
1,637,807	+		PS417_07445	0.13	+1.6
1,637,808	-		PS417_07445	0.13	+1.5
1,638,227	+				+0.1
1,638,228	-		PS417_07445	0.33	-0.0
1,638,249	-		PS417_07445	0.34	+0.2
1,638,348	-		PS417_07445	0.39	+0.8
1,638,503	+		PS417_07445	0.47	+0.8
1,638,504	-		PS417_07445	0.47	+0.6
1,638,504	-		PS417_07445	0.47	+0.8
1,638,513	-		PS417_07445	0.47	+0.1
1,638,723	-		PS417_07445	0.57	-0.1
1,638,723	-		PS417_07445	0.57	+0.7
1,638,723	-		PS417_07445	0.57	+0.8
1,638,794	+		PS417_07445	0.61	+0.3
1,638,794	+		PS417_07445	0.61	+1.4
1,638,828	+		PS417_07445	0.63	+1.5
1,638,828	+		PS417_07445	0.63	+0.4
1,639,002	-		PS417_07445	0.71	+0.7
1,639,136	+		PS417_07445	0.78	-0.0
1,639,145	+		PS417_07445	0.78	+0.4
1,639,145	+		PS417_07445	0.78	+0.2
1,639,146	-		PS417_07445	0.78	-1.3
1,639,146	-		PS417_07445	0.78	+1.7
1,639,175	+		PS417_07445	0.79	-0.6
1,639,204	-				+1.1
1,639,358	+		PS417_07445	0.88	+0.7
1,639,361	+		PS417_07445	0.89	+0.5
1,639,361	+		PS417_07445	0.89	-0.0
1,639,361	+		PS417_07445	0.89	+2.2
1,639,500	-				+1.2
1,639,599	+				-0.1
1,639,660	+				-0.0
1,639,812	+		PS417_07450	0.36	+1.4
1,639,958	+		PS417_07450	0.63	+0.7
1,639,958	+		PS417_07450	0.63	+0.7
1,639,959	-		PS417_07450	0.63	-1.6
1,640,154	-				-0.4
1,640,154	-				+1.2
1,640,196	+				-0.3
1,640,306	+		PS417_07455	0.15	+1.3
1,640,307	-		PS417_07455	0.16	+0.4
1,640,547	-		PS417_07455	0.46	-0.2