Strain Fitness in Pseudomonas simiae WCS417 around PS417_06160

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
1,364,522	-				+0.2
1,364,705	+				-0.0
1,364,708	-				-0.4
1,364,736	+				+0.3
1,364,907	-				+1.6
1,365,045	-		PS417_06160	0.11	+0.6
1,365,276	+		PS417_06160	0.20	+1.0
1,365,277	-		PS417_06160	0.20	+0.1
1,365,277	-		PS417_06160	0.20	+0.9
1,365,404	+		PS417_06160	0.25	-1.2
1,365,479	+		PS417_06160	0.28	+0.6
1,365,480	-		PS417_06160	0.28	+0.6
1,365,482	+		PS417_06160	0.28	+0.8
1,365,482	+		PS417_06160	0.28	+0.6
1,365,483	-		PS417_06160	0.28	+0.8
1,365,662	+		PS417_06160	0.35	+0.6
1,365,663	-		PS417_06160	0.35	+2.2
1,365,672	-		PS417_06160	0.35	+0.8
1,365,851	+		PS417_06160	0.42	+1.4
1,366,058	+		PS417_06160	0.50	+0.6
1,366,472	+		PS417_06160	0.66	+1.4
1,366,472	+		PS417_06160	0.66	+1.3
1,366,473	-		PS417_06160	0.66	+0.9
1,366,485	-		PS417_06160	0.67	+0.8
1,366,547	+		PS417_06160	0.69	+0.9
1,366,593	-		PS417_06160	0.71	+0.8
1,366,724	+		PS417_06160	0.76	+5.6
1,366,724	+				+0.1
1,366,725	-		PS417_06160	0.76	+0.8
1,366,751	+		PS417_06160	0.77	+1.5
1,366,751	+		PS417_06160	0.77	+0.8
1,366,752	-		PS417_06160	0.77	+0.5
1,366,752	-		PS417_06160	0.77	+0.6
1,366,752	-		PS417_06160	0.77	+1.0
1,367,078	+		PS417_06160	0.90	+1.5
1,367,214	-				+0.4
1,367,350	+				+1.1
1,367,351	-				+0.8
1,367,351	-				+1.7
1,367,415	+				+0.2
1,367,416	-				+0.1
1,367,438	-				+0.8
1,367,438	-				+0.4
1,367,464	+				-0.2
1,367,464	+				+0.4
1,367,465	-				-0.7
1,367,465	-				+0.1
1,367,465	-				-1.1
1,367,483	+				+0.4
1,367,484	-				-0.9
1,367,484	-				-1.1
1,367,484	-				+0.3
1,367,492	+				-0.2
1,367,493	-				+0.1
1,367,493	-				-2.4
1,367,493	-				+0.1
1,367,493	-				-0.1
1,367,493	-				+0.0
1,367,499	-				+0.5
1,367,527	+				+1.0
1,367,528	-				+0.9
1,367,528	-				-1.9
1,367,535	-				-0.4
1,367,556	+				+1.5
1,367,570	-				+0.5
1,367,606	+				+1.0
1,367,897	+		PS417_06165	0.41	+0.2
1,367,898	-		PS417_06165	0.41	-0.4
1,367,898	-		PS417_06165	0.41	+0.2
1,368,062	-		PS417_06165	0.61	+0.2
1,368,128	-		PS417_06165	0.70	+2.2
1,368,340	-				+1.9