Experiment: R2A control with 0.2X Vogels
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03820 and PS417_03825 overlap by 4 nucleotides PS417_03825 and PS417_03830 are separated by 130 nucleotides
PS417_03820: PS417_03820 - ribosomal large subunit pseudouridine synthase D, at 861,582 to 862,544
_03820
PS417_03825: PS417_03825 - laccase, at 862,541 to 863,266
_03825
PS417_03830: PS417_03830 - protein disaggregation chaperone, at 863,397 to 865,961
_03830
Position (kb) 862
863
864 Strain fitness (log2 ratio) -2
-1
0
1
2 at 861.572 kb on + strand at 862.717 kb on + strand, within PS417_03825 at 862.718 kb on - strand, within PS417_03825 at 862.974 kb on + strand, within PS417_03825 at 862.974 kb on + strand, within PS417_03825 at 862.974 kb on + strand, within PS417_03825 at 862.975 kb on - strand, within PS417_03825 at 863.117 kb on + strand, within PS417_03825 at 863.117 kb on + strand, within PS417_03825 at 863.118 kb on - strand, within PS417_03825 at 863.118 kb on - strand, within PS417_03825 at 863.118 kb on - strand, within PS417_03825 at 863.118 kb on - strand, within PS417_03825 at 863.118 kb on - strand, within PS417_03825 at 863.118 kb on - strand, within PS417_03825 at 863.119 kb on + strand, within PS417_03825 at 863.119 kb on + strand, within PS417_03825 at 863.119 kb on + strand, within PS417_03825 at 863.120 kb on - strand, within PS417_03825 at 863.248 kb on + strand at 863.249 kb on - strand at 863.324 kb on + strand at 863.324 kb on + strand at 863.325 kb on - strand at 863.325 kb on - strand at 863.325 kb on - strand at 863.325 kb on - strand at 863.332 kb on + strand at 863.363 kb on + strand at 863.364 kb on - strand at 863.364 kb on - strand at 863.366 kb on - strand at 863.396 kb on - strand at 863.402 kb on + strand at 863.426 kb on - strand at 863.531 kb on + strand at 863.642 kb on + strand at 863.642 kb on + strand at 863.642 kb on + strand at 863.642 kb on + strand at 863.643 kb on - strand at 863.643 kb on - strand at 863.643 kb on - strand at 863.882 kb on + strand, within PS417_03830 at 863.886 kb on + strand, within PS417_03830 at 863.886 kb on + strand, within PS417_03830 at 863.887 kb on - strand, within PS417_03830 at 864.093 kb on - strand, within PS417_03830
Per-strain Table
Position Strand Gene LocusTag Fraction R2A control with 0.2X Vogels remove 861,572 + +0.1 862,717 + PS417_03825 0.24 -0.2 862,718 - PS417_03825 0.24 -0.1 862,974 + PS417_03825 0.60 +0.4 862,974 + PS417_03825 0.60 +0.2 862,974 + PS417_03825 0.60 +0.3 862,975 - PS417_03825 0.60 -0.3 863,117 + PS417_03825 0.79 +0.8 863,117 + PS417_03825 0.79 +2.6 863,118 - PS417_03825 0.79 +2.3 863,118 - PS417_03825 0.79 -0.3 863,118 - PS417_03825 0.79 -0.9 863,118 - PS417_03825 0.79 +0.1 863,118 - PS417_03825 0.79 +1.1 863,118 - PS417_03825 0.79 -2.2 863,119 + PS417_03825 0.80 +0.3 863,119 + PS417_03825 0.80 +0.8 863,119 + PS417_03825 0.80 +0.6 863,120 - PS417_03825 0.80 -0.4 863,248 + -0.1 863,249 - +0.4 863,324 + -0.8 863,324 + +0.1 863,325 - +0.1 863,325 - +0.3 863,325 - -0.1 863,325 - +0.6 863,332 + -0.7 863,363 + -1.3 863,364 - -1.0 863,364 - -0.5 863,366 - +0.7 863,396 - -0.3 863,402 + -0.6 863,426 - +1.6 863,531 + -0.2 863,642 + +0.5 863,642 + -0.3 863,642 + +0.2 863,642 + +0.1 863,643 - +0.1 863,643 - -0.3 863,643 - -0.2 863,882 + PS417_03830 0.19 -0.2 863,886 + PS417_03830 0.19 -0.7 863,886 + PS417_03830 0.19 -1.6 863,887 - PS417_03830 0.19 +0.1 864,093 - PS417_03830 0.27 +0.6
Or see this region's nucleotide sequence