Strain Fitness in Escherichia coli BW25113 around b2335

Experiment: N4_phage 0.00009375 MOI TC4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N4_phage 0.00009375 MOI TC4
2,448,112	-				+0.5
2,448,131	-	yfcP	b2333	0.11	+0.5
2,448,145	-	yfcP	b2333	0.13	+0.2
2,448,197	-	yfcP	b2333	0.23	+0.3
2,448,197	-	yfcP	b2333	0.23	-0.7
2,448,222	-	yfcP	b2333	0.28	+0.4
2,448,222	-	yfcP	b2333	0.28	+0.3
2,448,257	+	yfcP	b2333	0.34	+0.1
2,448,272	+	yfcP	b2333	0.37	-0.8
2,448,272	+	yfcP	b2333	0.37	-0.2
2,448,288	-	yfcP	b2333	0.40	-2.6
2,448,313	+	yfcP	b2333	0.44	-2.1
2,448,315	+	yfcP	b2333	0.45	-0.1
2,448,382	+	yfcP	b2333	0.57	+0.2
2,448,382	+	yfcP	b2333	0.57	-1.5
2,448,382	+	yfcP	b2333	0.57	+0.5
2,448,398	-	yfcP	b2333	0.60	+0.4
2,448,398	-	yfcP	b2333	0.60	-1.2
2,448,405	+	yfcP	b2333	0.61	-0.9
2,448,405	+	yfcP	b2333	0.61	+0.0
2,448,413	-	yfcP	b2333	0.63	-1.1
2,448,413	-	yfcP	b2333	0.63	-0.0
2,448,438	+	yfcP	b2333	0.68	-2.6
2,448,452	+	yfcP	b2333	0.70	-3.6
2,448,467	-	yfcP	b2333	0.73	-1.7
2,448,467	-	yfcP	b2333	0.73	-1.9
2,448,478	-	yfcP	b2333	0.75	-1.3
2,448,495	-	yfcP	b2333	0.78	+1.1
2,448,495	-	yfcP	b2333	0.78	-0.6
2,448,495	-	yfcP	b2333	0.78	+0.4
2,448,519	+	yfcP	b2333	0.83	+0.5
2,448,527	-	yfcP	b2333	0.84	-3.0
2,448,527	-	yfcP	b2333	0.84	-1.1
2,448,542	+	yfcP	b2333	0.87	-0.6
2,448,554	+	yfcP	b2333	0.89	+0.9
2,448,559	+				+0.1
2,448,567	-				-0.6
2,448,568	+				+1.1
2,448,568	+				-2.4
2,448,572	+				-0.1
2,448,580	-				-0.8
2,448,589	+				+3.5
2,448,632	-				+0.2
2,448,632	-				-0.4
2,448,657	+				+0.8
2,448,657	+				-2.5
2,448,665	-	yfcQ	b2334	0.11	-0.3
2,448,750	-	yfcQ	b2334	0.29	-1.4
2,448,787	+	yfcQ	b2334	0.36	+0.2
2,448,826	-	yfcQ	b2334	0.44	-0.4
2,448,826	-	yfcQ	b2334	0.44	+1.1
2,448,841	+	yfcQ	b2334	0.47	-2.8
2,448,841	+	yfcQ	b2334	0.47	-0.3
2,448,841	+	yfcQ	b2334	0.47	-0.6
2,448,841	+	yfcQ	b2334	0.47	-2.7
2,448,846	+	yfcQ	b2334	0.48	+0.6
2,448,849	-	yfcQ	b2334	0.49	+1.1
2,448,864	+	yfcQ	b2334	0.52	-0.6
2,448,891	+	yfcQ	b2334	0.58	-1.0
2,449,084	-				+0.1
2,449,084	-				-1.8
2,449,108	+				+0.9
2,449,160	+	yfcR	b2335	0.13	-0.7
2,449,160	+	yfcR	b2335	0.13	+0.2
2,449,166	+	yfcR	b2335	0.14	-0.3
2,449,166	+	yfcR	b2335	0.14	-1.0
2,449,178	-	yfcR	b2335	0.16	-1.0
2,449,240	-	yfcR	b2335	0.28	-0.4
2,449,284	-	yfcR	b2335	0.37	-0.4
2,449,293	-	yfcR	b2335	0.39	-1.2
2,449,293	-	yfcR	b2335	0.39	+0.1
2,449,297	-	yfcR	b2335	0.40	-0.1
2,449,303	-	yfcR	b2335	0.41	+0.6
2,449,323	+	yfcR	b2335	0.45	-2.0
2,449,357	-	yfcR	b2335	0.51	-0.8
2,449,359	+	yfcR	b2335	0.52	-1.8
2,449,385	+	yfcR	b2335	0.57	-0.9
2,449,418	-	yfcR	b2335	0.63	+0.0
2,449,459	+	yfcR	b2335	0.71	+0.3
2,449,459	+	yfcR	b2335	0.71	+0.9
2,449,459	+	yfcR	b2335	0.71	-3.2
2,449,464	+	yfcR	b2335	0.72	+1.5
2,449,464	+	yfcR	b2335	0.72	-2.4
2,449,469	+	yfcR	b2335	0.73	-1.0
2,449,477	-	yfcR	b2335	0.75	+0.2
2,449,482	-	yfcR	b2335	0.76	-0.6
2,449,550	+	yfcR	b2335	0.89	-1.3
2,449,555	+				+0.0
2,449,587	+				-0.2
2,449,587	+				-1.1
2,449,694	-	yfcS	b2336	0.12	-0.6
2,449,828	+	yfcS	b2336	0.29	-2.6
2,449,828	+	yfcS	b2336	0.29	+1.0
2,449,873	+	yfcS	b2336	0.35	-0.6
2,449,873	+	yfcS	b2336	0.35	+0.2
2,449,890	+	yfcS	b2336	0.38	-0.6
2,449,931	+	yfcS	b2336	0.43	+0.1
2,449,939	-	yfcS	b2336	0.44	-0.5
2,449,949	-	yfcS	b2336	0.46	+1.4
2,450,018	-	yfcS	b2336	0.55	-3.7
2,450,209	-	yfcS	b2336	0.80	+0.6
2,450,211	+	yfcS	b2336	0.80	-1.8
2,450,262	-	yfcS	b2336	0.87	-0.4
2,450,327	-				-2.5
2,450,588	-				-0.2
2,450,589	-				+0.5