Strain Fitness in Escherichia coli BW25113 around b1538

Experiment: N4_phage 0.009375 MOI TC2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N4_phage 0.009375 MOI TC2
1,622,405	-	ydeI	b1536	0.70	+3.6
1,622,405	-	ydeI	b1536	0.70	+2.6
1,622,409	+	ydeI	b1536	0.71	+2.6
1,622,409	+	ydeI	b1536	0.71	+3.6
1,622,420	+	ydeI	b1536	0.74	+2.6
1,622,420	+	ydeI	b1536	0.74	+3.6
1,622,420	+	ydeI	b1536	0.74	+2.6
1,622,471	-	ydeI	b1536	0.87	+3.6
1,622,527	+				+3.6
1,622,774	-				+0.0
1,622,834	+				+3.6
1,622,835	-				+3.6
1,622,838	-				+1.4
1,622,868	+	ydeJ	b1537	0.14	+3.6
1,622,868	+	ydeJ	b1537	0.14	+3.6
1,622,934	+	ydeJ	b1537	0.26	+0.8
1,622,983	+	ydeJ	b1537	0.36	+2.0
1,622,987	+	ydeJ	b1537	0.37	-0.1
1,623,043	+	ydeJ	b1537	0.47	-1.1
1,623,097	+	ydeJ	b1537	0.58	-0.5
1,623,097	+	ydeJ	b1537	0.58	+0.2
1,623,170	+	ydeJ	b1537	0.72	-0.5
1,623,211	+	ydeJ	b1537	0.80	-1.8
1,623,259	+	ydeJ	b1537	0.89	+0.9
1,623,259	+	ydeJ	b1537	0.89	+0.2
1,623,297	+				+1.0
1,623,297	+				-0.6
1,623,309	-				+2.9
1,623,309	-				+1.6
1,623,411	-				-0.1
1,623,449	+				-1.1
1,623,449	+				-0.2
1,623,501	+				-0.9
1,623,519	-				+0.8
1,623,739	+	dcp	b1538	0.19	+0.6
1,623,739	+	dcp	b1538	0.19	+0.0
1,623,752	-	dcp	b1538	0.19	+0.2
1,623,772	-	dcp	b1538	0.20	+1.1
1,623,772	-	dcp	b1538	0.20	-1.6
1,623,801	+	dcp	b1538	0.22	-2.1
1,623,844	-	dcp	b1538	0.24	-1.3
1,623,892	-	dcp	b1538	0.26	-0.6
1,623,951	+	dcp	b1538	0.29	-0.1
1,624,060	-	dcp	b1538	0.34	-0.6
1,624,089	+	dcp	b1538	0.36	+3.6
1,624,237	-	dcp	b1538	0.43	-1.4
1,624,297	-	dcp	b1538	0.46	-0.0
1,624,987	+	dcp	b1538	0.80	-0.6
1,624,992	+	dcp	b1538	0.80	-0.7
1,625,044	+	dcp	b1538	0.82	+1.6
1,625,044	+	dcp	b1538	0.82	+0.6
1,625,169	-	dcp	b1538	0.88	+1.2
1,625,380	+				-0.3
1,625,442	-				-0.6
1,625,443	-				-2.2
1,625,443	-				-1.9
1,625,681	+	ydfG	b1539	0.19	-1.7
1,625,871	+	ydfG	b1539	0.44	+0.4
1,625,871	+	ydfG	b1539	0.44	-0.2
1,626,043	-	ydfG	b1539	0.67	-1.9