Experiment: Growth with Chloride 500 mM; with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0847 and PP_0848 are separated by 10 nucleotides PP_0848 and PP_0849 are separated by 88 nucleotides PP_0849 and PP_0850 are separated by 28 nucleotides PP_0850 and PP_0851 are separated by 8 nucleotides PP_0851 and PP_0852 overlap by 4 nucleotides
PP_0847: PP_0847 - ferredoxin, at 982,990 to 983,331
_0847
PP_0848: PP_0848 - donor of Fe2+ and regulator of cysteine desulfurase activity, at 983,342 to 983,542
_0848
PP_0849: PP_0849 - Nucleoside diphosphate kinase, at 983,631 to 984,056
_0849
PP_0850: PP_0850 - Dual-specificity RNA methyltransferase RlmN, at 984,085 to 985,230
_0850
PP_0851: PP_0851 - Type IV pili biogenesis protein PilF, at 985,239 to 986,006
_0851
PP_0852: PP_0852 - Transcriptional regulator, Cro/CI family, at 986,003 to 987,010
_0852
Position (kb) 984
985
986 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 983.339 kb on + strand at 983.339 kb on + strand at 983.340 kb on - strand at 983.340 kb on - strand at 983.340 kb on - strand at 983.340 kb on - strand at 983.340 kb on - strand at 983.365 kb on - strand, within PP_0848 at 983.417 kb on + strand, within PP_0848 at 983.417 kb on + strand, within PP_0848 at 983.418 kb on - strand, within PP_0848 at 983.418 kb on - strand, within PP_0848 at 983.540 kb on + strand at 983.540 kb on + strand at 983.583 kb on + strand at 983.583 kb on + strand at 984.043 kb on + strand at 984.043 kb on + strand at 984.044 kb on - strand at 984.067 kb on - strand at 984.096 kb on + strand at 984.096 kb on + strand at 984.156 kb on + strand at 984.156 kb on + strand at 984.242 kb on + strand, within PP_0850 at 984.242 kb on + strand, within PP_0850 at 984.242 kb on + strand, within PP_0850 at 984.243 kb on - strand, within PP_0850 at 984.243 kb on - strand, within PP_0850 at 984.333 kb on + strand, within PP_0850 at 984.333 kb on + strand, within PP_0850 at 984.334 kb on - strand, within PP_0850 at 984.379 kb on + strand, within PP_0850 at 984.379 kb on + strand, within PP_0850 at 984.380 kb on - strand, within PP_0850 at 984.380 kb on - strand, within PP_0850 at 984.847 kb on + strand, within PP_0850 at 984.847 kb on + strand, within PP_0850 at 984.848 kb on - strand, within PP_0850 at 984.848 kb on - strand, within PP_0850 at 984.889 kb on + strand, within PP_0850 at 984.889 kb on + strand, within PP_0850 at 984.943 kb on + strand, within PP_0850 at 984.959 kb on + strand, within PP_0850 at 985.086 kb on + strand, within PP_0850 at 985.149 kb on + strand at 985.168 kb on + strand at 985.169 kb on - strand at 985.169 kb on - strand at 985.169 kb on - strand at 985.235 kb on + strand at 985.236 kb on - strand at 985.236 kb on - strand at 985.362 kb on + strand, within PP_0851 at 985.362 kb on + strand, within PP_0851 at 985.362 kb on + strand, within PP_0851 at 985.363 kb on - strand, within PP_0851 at 985.363 kb on - strand, within PP_0851 at 985.363 kb on - strand, within PP_0851 at 985.384 kb on - strand, within PP_0851 at 985.543 kb on + strand, within PP_0851 at 985.543 kb on + strand, within PP_0851 at 985.543 kb on + strand, within PP_0851 at 985.544 kb on - strand, within PP_0851 at 985.576 kb on - strand, within PP_0851 at 985.591 kb on - strand, within PP_0851 at 985.653 kb on + strand, within PP_0851 at 985.731 kb on + strand, within PP_0851 at 985.731 kb on + strand, within PP_0851 at 985.731 kb on + strand, within PP_0851 at 985.815 kb on + strand, within PP_0851 at 985.815 kb on + strand, within PP_0851 at 985.815 kb on + strand, within PP_0851 at 985.815 kb on + strand, within PP_0851 at 985.815 kb on + strand, within PP_0851 at 985.815 kb on + strand, within PP_0851 at 985.815 kb on + strand, within PP_0851 at 985.815 kb on + strand, within PP_0851 at 985.815 kb on + strand, within PP_0851 at 985.815 kb on + strand, within PP_0851 at 985.833 kb on + strand, within PP_0851 at 985.833 kb on + strand, within PP_0851 at 985.833 kb on + strand, within PP_0851 at 985.836 kb on + strand, within PP_0851 at 985.836 kb on + strand, within PP_0851 at 985.836 kb on + strand, within PP_0851 at 985.836 kb on + strand, within PP_0851 at 985.836 kb on + strand, within PP_0851 at 985.948 kb on + strand at 985.959 kb on + strand at 985.986 kb on + strand at 985.986 kb on + strand at 986.025 kb on + strand at 986.025 kb on + strand at 986.110 kb on + strand, within PP_0852 at 986.110 kb on + strand, within PP_0852 at 986.179 kb on + strand, within PP_0852 at 986.195 kb on + strand, within PP_0852
Per-strain Table
Position Strand Gene LocusTag Fraction Growth with Chloride 500 mM; with MOPS remove 983,339 + -0.6 983,339 + +1.2 983,340 - +3.2 983,340 - +0.6 983,340 - -1.1 983,340 - +1.6 983,340 - +0.5 983,365 - PP_0848 0.11 -1.1 983,417 + PP_0848 0.37 -1.3 983,417 + PP_0848 0.37 +0.7 983,418 - PP_0848 0.38 -2.6 983,418 - PP_0848 0.38 +0.7 983,540 + -0.4 983,540 + +1.4 983,583 + +0.1 983,583 + -0.0 984,043 + +1.2 984,043 + -0.6 984,044 - +2.6 984,067 - +1.2 984,096 + +1.4 984,096 + +1.8 984,156 + -1.2 984,156 + +2.9 984,242 + PP_0850 0.14 -2.5 984,242 + PP_0850 0.14 -1.0 984,242 + PP_0850 0.14 +0.4 984,243 - PP_0850 0.14 +3.5 984,243 - PP_0850 0.14 -2.2 984,333 + PP_0850 0.22 +0.6 984,333 + PP_0850 0.22 +2.1 984,334 - PP_0850 0.22 -1.5 984,379 + PP_0850 0.26 +2.5 984,379 + PP_0850 0.26 -0.6 984,380 - PP_0850 0.26 +1.5 984,380 - PP_0850 0.26 +0.9 984,847 + PP_0850 0.66 +1.3 984,847 + PP_0850 0.66 +0.6 984,848 - PP_0850 0.67 +1.0 984,848 - PP_0850 0.67 +0.5 984,889 + PP_0850 0.70 +0.0 984,889 + PP_0850 0.70 -0.5 984,943 + PP_0850 0.75 +0.1 984,959 + PP_0850 0.76 +1.1 985,086 + PP_0850 0.87 +0.7 985,149 + +0.2 985,168 + +0.4 985,169 - -2.3 985,169 - +0.3 985,169 - +2.0 985,235 + +0.2 985,236 - +0.7 985,236 - -2.8 985,362 + PP_0851 0.16 +0.8 985,362 + PP_0851 0.16 -1.2 985,362 + PP_0851 0.16 +1.7 985,363 - PP_0851 0.16 -0.6 985,363 - PP_0851 0.16 +1.2 985,363 - PP_0851 0.16 -2.2 985,384 - PP_0851 0.19 -1.3 985,543 + PP_0851 0.40 +1.1 985,543 + PP_0851 0.40 +0.0 985,543 + PP_0851 0.40 -2.2 985,544 - PP_0851 0.40 +3.0 985,576 - PP_0851 0.44 +1.0 985,591 - PP_0851 0.46 +0.4 985,653 + PP_0851 0.54 +0.2 985,731 + PP_0851 0.64 -0.9 985,731 + PP_0851 0.64 +0.9 985,731 + PP_0851 0.64 -0.0 985,815 + PP_0851 0.75 +1.4 985,815 + PP_0851 0.75 -0.2 985,815 + PP_0851 0.75 +0.3 985,815 + PP_0851 0.75 -2.2 985,815 + PP_0851 0.75 +0.2 985,815 + PP_0851 0.75 +0.5 985,815 + PP_0851 0.75 +0.3 985,815 + PP_0851 0.75 -0.5 985,815 + PP_0851 0.75 +0.3 985,815 + PP_0851 0.75 -1.2 985,833 + PP_0851 0.77 +0.4 985,833 + PP_0851 0.77 -2.8 985,833 + PP_0851 0.77 -0.1 985,836 + PP_0851 0.78 +0.3 985,836 + PP_0851 0.78 -0.4 985,836 + PP_0851 0.78 -1.5 985,836 + PP_0851 0.78 -1.7 985,836 + PP_0851 0.78 -0.7 985,948 + +1.0 985,959 + -0.0 985,986 + -1.6 985,986 + +0.5 986,025 + +0.8 986,025 + -2.5 986,110 + PP_0852 0.11 -0.6 986,110 + PP_0852 0.11 +0.2 986,179 + PP_0852 0.17 -3.1 986,195 + PP_0852 0.19 -0.3
Or see this region's nucleotide sequence