Strain Fitness in Escherichia coli BW25113 around b3048

Experiment: N4_phage 0.09375 MOI TC1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N4_phage 0.09375 MOI TC1
3,187,654	-				-1.3
3,187,658	+				-1.5
3,187,668	+				-0.4
3,187,669	+				-2.6
3,187,669	+				-1.0
3,187,669	+				-0.0
3,187,680	+				-0.5
3,187,681	-				+1.6
3,187,684	+				-2.1
3,187,684	-				+4.2
3,187,691	+				-0.2
3,187,700	-				+2.6
3,187,700	-				+1.6
3,187,704	+				-0.5
3,187,723	+				-0.7
3,187,723	+				+0.9
3,187,735	+				+0.1
3,187,748	+				+0.5
3,187,750	+				-0.9
3,187,750	+				+0.4
3,187,750	+				+0.2
3,187,750	+				+0.6
3,187,751	+				-1.3
3,187,751	+				+0.6
3,187,751	+				-0.7
3,187,751	+				-0.5
3,187,753	+				+1.0
3,187,753	+				+0.7
3,187,758	+				+0.3
3,187,763	+				-0.3
3,187,763	+				-0.5
3,187,771	+				-0.3
3,187,773	+				-1.1
3,187,784	+				-1.0
3,187,784	+				-0.1
3,187,827	+				+0.8
3,187,827	+				+0.6
3,187,828	+				-0.8
3,187,828	+				-0.4
3,187,828	+				+0.3
3,187,842	+				-1.8
3,187,940	+				+2.6
3,187,941	-				+1.4
3,187,945	+				+2.6
3,187,945	+				+2.6
3,187,948	-				+2.6
3,187,948	-				+2.6
3,187,948	-				+0.3
3,187,955	+				+2.6
3,187,960	-				+2.0
3,187,960	-				+1.5
3,187,962	-				+0.6
3,187,962	-				-0.0
3,187,964	+				+1.6
3,187,969	+				+2.6
3,187,972	-				+2.6
3,187,972	-				+0.6
3,187,972	-				-0.2
3,187,976	-				-1.4
3,187,976	-				-0.2
3,187,977	-				+0.3
3,187,986	-	yqiH	b3047	0.11	+2.6
3,187,986	-	yqiH	b3047	0.11	+2.6
3,187,992	+	yqiH	b3047	0.12	+0.3
3,187,992	+	yqiH	b3047	0.12	+1.0
3,188,010	+	yqiH	b3047	0.14	+2.6
3,188,010	+	yqiH	b3047	0.14	+2.6
3,188,028	-	yqiH	b3047	0.17	+2.6
3,188,032	+	yqiH	b3047	0.17	+1.6
3,188,074	+	yqiH	b3047	0.23	+1.0
3,188,077	-	yqiH	b3047	0.23	+2.6
3,188,131	+	yqiH	b3047	0.30	+1.6
3,188,134	+	yqiH	b3047	0.31	+2.6
3,188,135	+	yqiH	b3047	0.31	-0.0
3,188,264	-	yqiH	b3047	0.48	-0.3
3,188,286	+	yqiH	b3047	0.51	+0.8
3,188,293	+	yqiH	b3047	0.52	-1.5
3,188,293	+	yqiH	b3047	0.52	-0.6
3,188,294	-	yqiH	b3047	0.52	+1.6
3,188,296	-	yqiH	b3047	0.52	+1.6
3,188,296	-	yqiH	b3047	0.52	-0.0
3,188,298	-	yqiH	b3047	0.53	+2.6
3,188,298	-	yqiH	b3047	0.53	+1.6
3,188,343	-	yqiH	b3047	0.59	+2.6
3,188,346	+	yqiH	b3047	0.59	+1.0
3,188,766	-	yqiI	b3048	0.11	+2.6
3,188,811	+	yqiI	b3048	0.15	+2.6
3,188,868	+	yqiI	b3048	0.20	+2.6
3,188,871	-	yqiI	b3048	0.20	+1.6
3,188,882	-	yqiI	b3048	0.21	+2.6
3,188,884	-	yqiI	b3048	0.22	+2.6
3,189,328	+	yqiI	b3048	0.63	+0.3
3,189,398	-	yqiI	b3048	0.70	+4.9
3,189,403	-	yqiI	b3048	0.70	+2.6
3,189,413	+	yqiI	b3048	0.71	-0.2
3,189,413	+	yqiI	b3048	0.71	-0.3
3,189,436	+	yqiI	b3048	0.73	+2.6
3,189,436	+	yqiI	b3048	0.73	+0.7
3,189,436	+	yqiI	b3048	0.73	+0.9
3,189,436	+	yqiI	b3048	0.73	-0.6
3,189,436	+	yqiI	b3048	0.73	+0.9
3,189,436	+	yqiI	b3048	0.73	+0.2
3,189,436	+	yqiI	b3048	0.73	+1.0
3,189,436	+	yqiI	b3048	0.73	-0.9
3,189,436	+	yqiI	b3048	0.73	-0.6
3,189,436	+	yqiI	b3048	0.73	-1.2
3,189,436	+	yqiI	b3048	0.73	+0.9
3,189,436	+	yqiI	b3048	0.73	+1.1
3,189,436	+	yqiI	b3048	0.73	+0.4
3,189,436	+	yqiI	b3048	0.73	+0.9
3,189,436	+	yqiI	b3048	0.73	-0.0
3,189,436	+	yqiI	b3048	0.73	-1.4
3,189,436	+	yqiI	b3048	0.73	+0.3
3,189,436	+	yqiI	b3048	0.73	+1.3
3,189,436	+	yqiI	b3048	0.73	-2.2
3,189,436	+	yqiI	b3048	0.73	-1.0
3,189,436	+	yqiI	b3048	0.73	+0.5
3,189,441	+	yqiI	b3048	0.74	+0.4
3,189,441	+	yqiI	b3048	0.74	+0.8
3,189,441	+	yqiI	b3048	0.74	+0.3
3,189,441	+	yqiI	b3048	0.74	+1.0
3,189,451	+	yqiI	b3048	0.75	-0.7
3,189,451	+	yqiI	b3048	0.75	-0.6
3,189,495	+	yqiI	b3048	0.79	+1.3
3,189,516	-	yqiI	b3048	0.81	+2.6
3,189,516	-	yqiI	b3048	0.81	+2.6
3,189,537	-	yqiI	b3048	0.83	+0.5
3,189,539	+	yqiI	b3048	0.83	+1.8
3,189,555	-	yqiI	b3048	0.85	-2.0
3,189,581	-	yqiI	b3048	0.87	-1.7
3,189,601	+	yqiI	b3048	0.89	+0.9
3,189,609	-	yqiI	b3048	0.90	-1.7
3,189,612	-				-1.7
3,189,612	-				-0.4
3,189,621	+				+0.0
3,189,621	-				+1.3
3,189,621	-				+1.0
3,189,626	-				-1.5
3,189,628	+				+1.0
3,189,628	+				+1.2
3,189,628	+				-0.5
3,189,628	+				-2.0
3,189,628	+				+0.5
3,189,628	+				-1.3
3,189,628	+				+0.2
3,189,628	+				-1.0
3,189,628	+				-0.1
3,189,628	+				-0.8
3,189,628	+				+1.1
3,189,628	+				-0.5
3,189,628	+				+0.5
3,189,631	-				+3.4
3,189,633	+				-1.2
3,189,633	+				+1.1
3,189,634	-				+0.6
3,189,634	-				+1.3
3,189,636	-				-1.4
3,189,636	-				+1.6
3,189,636	-				-1.3
3,189,636	-				+0.1
3,189,636	-				+1.0
3,189,636	-				+1.0
3,189,636	-				+0.8
3,189,636	-				-0.3
3,189,636	-				-1.8
3,189,641	-				-0.6
3,189,645	+				+1.2
3,189,645	+				+1.2
3,189,652	-				-2.1
3,189,660	-				-0.4
3,189,665	+				-1.8
3,189,665	+				-0.5
3,189,669	+				+0.4
3,189,683	+				-0.1
3,189,684	+				-0.4
3,189,685	-				-0.2
3,189,755	+				-2.2
3,189,756	+				-0.9
3,189,760	-				-1.2
3,189,760	-				-0.5
3,189,762	-				+0.0
3,189,762	-				-0.1
3,189,762	-				-0.9
3,189,764	-				-0.5
3,189,764	-				+0.3
3,189,764	-				-0.1
3,189,764	-				+0.2
3,189,767	+				-0.7
3,189,775	-				-0.1
3,189,785	+	glgS	b3049	0.12	+0.3
3,189,793	-	glgS	b3049	0.16	-0.1
3,189,793	-	glgS	b3049	0.16	+0.6
3,189,793	-	glgS	b3049	0.16	+1.0
3,189,793	-	glgS	b3049	0.16	-0.6
3,189,793	-	glgS	b3049	0.16	+0.9
3,189,793	-	glgS	b3049	0.16	+0.4
3,189,794	+	glgS	b3049	0.16	-1.1
3,189,804	-	glgS	b3049	0.21	+0.9
3,189,809	-	glgS	b3049	0.24	+0.7
3,189,811	+	glgS	b3049	0.25	-1.6
3,189,811	+	glgS	b3049	0.25	+0.7
3,189,816	-	glgS	b3049	0.27	+0.1
3,189,851	+	glgS	b3049	0.45	+0.8
3,189,859	-	glgS	b3049	0.49	-0.2
3,189,861	-	glgS	b3049	0.50	-0.5
3,189,861	-	glgS	b3049	0.50	+0.6
3,189,891	+	glgS	b3049	0.65	+1.0
3,189,895	-	glgS	b3049	0.67	+0.1
3,189,899	-	glgS	b3049	0.69	-1.0
3,189,965	-				+0.1
3,189,967	-				+1.1
3,189,967	-				-0.9
3,189,979	+				-0.8
3,189,987	-				-0.2
3,189,990	+				+0.5
3,189,990	+				-1.5
3,189,995	-				+0.3
3,189,995	-				-1.2
3,190,023	+				+3.0
3,190,031	-				+1.2
3,190,031	-				-0.1
3,190,031	-				+0.3
3,190,036	-				-2.6
3,190,041	-				-0.8
3,190,041	-				-3.5
3,190,041	-				-0.8
3,190,047	+				+4.6
3,190,133	-				-1.3
3,190,138	-				+0.7
3,190,143	-				+0.3
3,190,143	-				+0.4
3,190,143	-				+0.2
3,190,150	+				-0.8
3,190,150	+				+0.6
3,190,207	+				-1.1
3,190,207	+				+1.1
3,190,215	+				+0.1
3,190,255	-				+1.6
3,190,276	+				+0.2
3,190,280	-				-0.2
3,190,284	-				+0.5
3,190,287	-				+0.7
3,190,289	-				+0.0
3,190,316	+	yqiJ	b3050	0.14	-0.4
3,190,318	+	yqiJ	b3050	0.14	+0.0
3,190,318	+	yqiJ	b3050	0.14	+0.6
3,190,324	+	yqiJ	b3050	0.15	-1.8
3,190,324	-	yqiJ	b3050	0.15	+0.7
3,190,324	-	yqiJ	b3050	0.15	-1.1
3,190,326	+	yqiJ	b3050	0.15	+0.3
3,190,326	+	yqiJ	b3050	0.15	+0.3
3,190,326	-	yqiJ	b3050	0.15	+1.3
3,190,326	-	yqiJ	b3050	0.15	+2.8
3,190,328	+	yqiJ	b3050	0.16	-0.7
3,190,328	+	yqiJ	b3050	0.16	-0.3
3,190,328	+	yqiJ	b3050	0.16	+0.2
3,190,328	+	yqiJ	b3050	0.16	+0.4
3,190,329	+	yqiJ	b3050	0.16	+0.7
3,190,329	-	yqiJ	b3050	0.16	+0.2
3,190,331	+	yqiJ	b3050	0.16	-0.0
3,190,332	+	yqiJ	b3050	0.16	-0.4
3,190,332	-	yqiJ	b3050	0.16	+0.2
3,190,333	+	yqiJ	b3050	0.16	-2.6
3,190,333	+	yqiJ	b3050	0.16	-1.6
3,190,334	+	yqiJ	b3050	0.17	-0.1
3,190,334	-	yqiJ	b3050	0.17	+0.1
3,190,336	-	yqiJ	b3050	0.17	+0.4
3,190,336	-	yqiJ	b3050	0.17	+1.2
3,190,342	-	yqiJ	b3050	0.18	+0.3
3,190,344	+	yqiJ	b3050	0.18	+0.8
3,190,344	+	yqiJ	b3050	0.18	-0.7
3,190,349	+	yqiJ	b3050	0.19	+1.0
3,190,349	+	yqiJ	b3050	0.19	-1.5
3,190,353	-	yqiJ	b3050	0.20	-0.6
3,190,353	-	yqiJ	b3050	0.20	+2.0
3,190,370	+	yqiJ	b3050	0.22	-0.4
3,190,370	+	yqiJ	b3050	0.22	-0.5
3,190,370	+	yqiJ	b3050	0.22	-1.1
3,190,372	-	yqiJ	b3050	0.23	+0.3
3,190,372	-	yqiJ	b3050	0.23	-1.0
3,190,378	-	yqiJ	b3050	0.23	+3.6
3,190,381	-	yqiJ	b3050	0.24	+1.0
3,190,381	-	yqiJ	b3050	0.24	+1.2
3,190,387	+	yqiJ	b3050	0.25	+0.2
3,190,387	+	yqiJ	b3050	0.25	+2.2
3,190,400	-	yqiJ	b3050	0.27	+0.8
3,190,425	+	yqiJ	b3050	0.31	-0.6
3,190,440	+	yqiJ	b3050	0.33	+0.7
3,190,442	+	yqiJ	b3050	0.34	-0.4
3,190,442	-	yqiJ	b3050	0.34	-0.1
3,190,448	-	yqiJ	b3050	0.35	-1.7
3,190,448	-	yqiJ	b3050	0.35	-0.4
3,190,480	+	yqiJ	b3050	0.40	+0.3
3,190,482	+	yqiJ	b3050	0.40	-2.4
3,190,482	+	yqiJ	b3050	0.40	-0.3
3,190,482	+	yqiJ	b3050	0.40	+0.1
3,190,482	+	yqiJ	b3050	0.40	-1.5
3,190,482	+	yqiJ	b3050	0.40	-1.4
3,190,485	-	yqiJ	b3050	0.40	-0.8
3,190,486	-	yqiJ	b3050	0.41	-0.4
3,190,486	-	yqiJ	b3050	0.41	+0.6
3,190,490	+	yqiJ	b3050	0.41	-0.0
3,190,490	+	yqiJ	b3050	0.41	+0.6
3,190,492	-	yqiJ	b3050	0.42	+2.6
3,190,493	+	yqiJ	b3050	0.42	-0.9
3,190,493	+	yqiJ	b3050	0.42	+0.9
3,190,496	+	yqiJ	b3050	0.42	+1.6
3,190,498	+	yqiJ	b3050	0.43	-1.8
3,190,498	+	yqiJ	b3050	0.43	+0.0
3,190,498	+	yqiJ	b3050	0.43	-0.5
3,190,499	+	yqiJ	b3050	0.43	+0.0
3,190,500	+	yqiJ	b3050	0.43	-0.0
3,190,500	+	yqiJ	b3050	0.43	-0.0
3,190,502	-	yqiJ	b3050	0.43	+0.2
3,190,507	-	yqiJ	b3050	0.44	+0.6
3,190,513	+	yqiJ	b3050	0.45	+1.4
3,190,513	+	yqiJ	b3050	0.45	+0.4
3,190,513	+	yqiJ	b3050	0.45	-1.1
3,190,513	+	yqiJ	b3050	0.45	+2.0
3,190,518	-	yqiJ	b3050	0.46	+2.6
3,190,521	+	yqiJ	b3050	0.46	+1.0
3,190,521	+	yqiJ	b3050	0.46	+2.2
3,190,521	+	yqiJ	b3050	0.46	-0.9
3,190,521	+	yqiJ	b3050	0.46	+1.2
3,190,521	+	yqiJ	b3050	0.46	-2.5
3,190,526	-	yqiJ	b3050	0.47	+2.6
3,190,532	+	yqiJ	b3050	0.48	-1.6
3,190,549	+	yqiJ	b3050	0.51	-0.2
3,190,549	+	yqiJ	b3050	0.51	+0.7
3,190,574	+	yqiJ	b3050	0.55	-1.5
3,190,611	+	yqiJ	b3050	0.60	+2.6
3,190,611	+	yqiJ	b3050	0.60	-0.6
3,190,615	+	yqiJ	b3050	0.61	+2.6
3,190,716	+	yqiJ	b3050	0.77	+0.6
3,190,716	+	yqiJ	b3050	0.77	+2.6