Experiment: ferulate (C); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_5197 and PP_5198 are separated by 3 nucleotides PP_5198 and PP_5199 overlap by 4 nucleotides PP_5199 and PP_5200 overlap by 4 nucleotides
PP_5197: PP_5197 - putative oxidoreductase involved in anerobic synthesis of ubiquinone, FAD/NAD(P)-binding domain, at 5,929,164 to 5,930,387
_5197
PP_5198: PP_5198 - conserved protein of unknown function, at 5,930,391 to 5,930,873
_5198
PP_5199: PP_5199 - 2-octaprenyl-6-methoxyphenyl hydroxylase, at 5,930,870 to 5,932,069
_5199
PP_5200: PP_5200 - proline aminopeptidase P II, at 5,932,066 to 5,933,400
_5200
Position (kb) 5930
5931
5932
5933 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5930.393 kb on - strand at 5930.428 kb on - strand at 5930.436 kb on - strand at 5930.663 kb on - strand, within PP_5198 at 5930.663 kb on - strand, within PP_5198 at 5930.663 kb on - strand, within PP_5198 at 5930.663 kb on - strand, within PP_5198 at 5930.663 kb on - strand, within PP_5198 at 5930.684 kb on - strand, within PP_5198 at 5930.714 kb on - strand, within PP_5198 at 5930.804 kb on - strand, within PP_5198 at 5930.804 kb on - strand, within PP_5198 at 5930.804 kb on - strand, within PP_5198 at 5932.239 kb on - strand, within PP_5200 at 5932.239 kb on - strand, within PP_5200 at 5932.239 kb on - strand, within PP_5200 at 5932.239 kb on - strand, within PP_5200 at 5932.304 kb on + strand, within PP_5200 at 5932.305 kb on - strand, within PP_5200 at 5932.490 kb on - strand, within PP_5200 at 5932.532 kb on + strand, within PP_5200 at 5932.533 kb on - strand, within PP_5200 at 5932.599 kb on - strand, within PP_5200 at 5932.671 kb on - strand, within PP_5200 at 5932.671 kb on - strand, within PP_5200 at 5932.716 kb on - strand, within PP_5200 at 5932.716 kb on - strand, within PP_5200 at 5932.752 kb on - strand, within PP_5200 at 5932.776 kb on - strand, within PP_5200 at 5932.776 kb on - strand, within PP_5200 at 5932.878 kb on - strand, within PP_5200 at 5932.888 kb on - strand, within PP_5200 at 5933.019 kb on - strand, within PP_5200 at 5933.019 kb on - strand, within PP_5200
Per-strain Table
Position Strand Gene LocusTag Fraction ferulate (C); with MOPS remove 5,930,393 - +1.3 5,930,428 - +0.1 5,930,436 - -1.8 5,930,663 - PP_5198 0.56 -1.1 5,930,663 - PP_5198 0.56 +1.3 5,930,663 - PP_5198 0.56 +0.6 5,930,663 - PP_5198 0.56 -0.7 5,930,663 - PP_5198 0.56 +0.9 5,930,684 - PP_5198 0.61 -2.0 5,930,714 - PP_5198 0.67 -1.2 5,930,804 - PP_5198 0.86 +0.4 5,930,804 - PP_5198 0.86 +0.1 5,930,804 - PP_5198 0.86 -0.8 5,932,239 - PP_5200 0.13 +0.9 5,932,239 - PP_5200 0.13 +0.7 5,932,239 - PP_5200 0.13 +2.6 5,932,239 - PP_5200 0.13 -0.1 5,932,304 + PP_5200 0.18 -0.1 5,932,305 - PP_5200 0.18 +2.4 5,932,490 - PP_5200 0.32 +1.4 5,932,532 + PP_5200 0.35 +0.9 5,932,533 - PP_5200 0.35 +0.8 5,932,599 - PP_5200 0.40 -0.4 5,932,671 - PP_5200 0.45 -0.1 5,932,671 - PP_5200 0.45 +1.8 5,932,716 - PP_5200 0.49 +0.0 5,932,716 - PP_5200 0.49 +2.4 5,932,752 - PP_5200 0.51 +2.6 5,932,776 - PP_5200 0.53 +1.1 5,932,776 - PP_5200 0.53 +1.9 5,932,878 - PP_5200 0.61 +2.0 5,932,888 - PP_5200 0.62 +1.9 5,933,019 - PP_5200 0.71 +1.9 5,933,019 - PP_5200 0.71 +1.1
Or see this region's nucleotide sequence