Experiment: growth on LB_noSalt plate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_16295 and PS417_16305 are separated by 398 nucleotides PS417_16305 and PS417_16310 are separated by 152 nucleotides PS417_16310 and PS417_16315 are separated by 62 nucleotides
PS417_16295: PS417_16295 - hypothetical protein, at 3,569,855 to 3,570,187
_16295
PS417_16305: PS417_16305 - tRNA-Ser, at 3,570,586 to 3,570,676
_16305
PS417_16310: PS417_16310 - membrane protein, at 3,570,829 to 3,571,500
_16310
PS417_16315: PS417_16315 - UDP-N-acetylenolpyruvoylglucosamine reductase, at 3,571,563 to 3,572,582
_16315
Position (kb)
3570
3571
3572 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3569.853 kb on + strand at 3569.856 kb on + strand at 3569.947 kb on + strand, within PS417_16295 at 3569.947 kb on + strand, within PS417_16295 at 3569.949 kb on + strand, within PS417_16295 at 3569.949 kb on + strand, within PS417_16295 at 3569.949 kb on + strand, within PS417_16295 at 3569.949 kb on + strand, within PS417_16295 at 3569.949 kb on + strand, within PS417_16295 at 3569.949 kb on + strand, within PS417_16295 at 3569.989 kb on - strand, within PS417_16295 at 3570.040 kb on - strand at 3570.040 kb on - strand, within PS417_16295 at 3570.063 kb on - strand, within PS417_16295 at 3570.181 kb on - strand at 3570.209 kb on - strand at 3570.312 kb on - strand at 3570.318 kb on - strand at 3570.365 kb on - strand at 3570.365 kb on - strand at 3570.383 kb on - strand at 3570.425 kb on - strand at 3570.484 kb on + strand at 3570.535 kb on + strand at 3570.535 kb on + strand at 3570.536 kb on - strand at 3570.845 kb on - strand at 3570.907 kb on + strand, within PS417_16310 at 3570.988 kb on - strand, within PS417_16310 at 3571.012 kb on + strand, within PS417_16310 at 3571.013 kb on - strand, within PS417_16310 at 3571.204 kb on + strand at 3571.405 kb on - strand, within PS417_16310 at 3571.408 kb on + strand, within PS417_16310 at 3571.409 kb on - strand, within PS417_16310 at 3571.409 kb on - strand, within PS417_16310 at 3571.432 kb on + strand, within PS417_16310 at 3571.432 kb on + strand, within PS417_16310 at 3571.432 kb on + strand, within PS417_16310 at 3571.433 kb on - strand at 3571.444 kb on + strand at 3571.564 kb on + strand at 3571.564 kb on + strand at 3571.565 kb on - strand at 3571.565 kb on - strand at 3571.568 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction growth on LB_noSalt plate remove 3,569,853 + -0.0 3,569,856 + +0.0 3,569,947 + PS417_16295 0.28 -0.2 3,569,947 + PS417_16295 0.28 +1.3 3,569,949 + PS417_16295 0.28 -0.6 3,569,949 + PS417_16295 0.28 -1.6 3,569,949 + PS417_16295 0.28 +0.5 3,569,949 + PS417_16295 0.28 -0.1 3,569,949 + PS417_16295 0.28 -0.4 3,569,949 + PS417_16295 0.28 +1.0 3,569,989 - PS417_16295 0.40 +0.1 3,570,040 - +1.8 3,570,040 - PS417_16295 0.56 -0.4 3,570,063 - PS417_16295 0.62 -0.4 3,570,181 - -0.4 3,570,209 - -0.7 3,570,312 - +0.2 3,570,318 - -0.4 3,570,365 - -0.4 3,570,365 - -0.5 3,570,383 - +0.4 3,570,425 - +0.0 3,570,484 + +1.8 3,570,535 + -0.0 3,570,535 + -0.5 3,570,536 - +0.0 3,570,845 - +0.3 3,570,907 + PS417_16310 0.12 -1.3 3,570,988 - PS417_16310 0.24 -2.2 3,571,012 + PS417_16310 0.27 -1.3 3,571,013 - PS417_16310 0.27 -2.5 3,571,204 + -1.3 3,571,405 - PS417_16310 0.86 -2.0 3,571,408 + PS417_16310 0.86 -1.8 3,571,409 - PS417_16310 0.86 -2.6 3,571,409 - PS417_16310 0.86 -1.9 3,571,432 + PS417_16310 0.90 -1.5 3,571,432 + PS417_16310 0.90 -0.9 3,571,432 + PS417_16310 0.90 -2.2 3,571,433 - -1.0 3,571,444 + -2.3 3,571,564 + -1.3 3,571,564 + +1.0 3,571,565 - +0.6 3,571,565 - -0.4 3,571,568 - -0.3
Or see this region's nucleotide sequence