Experiment: Phage 95.3 + bacteria
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu2761 and Atu2762 are separated by 15 nucleotides Atu2762 and Atu2763 are separated by 139 nucleotides Atu2763 and Atu2764 are separated by 276 nucleotides Atu2764 and Atu2765 are separated by 72 nucleotides
Atu2761: Atu2761 - exodeoxyribonuclease III, at 2,762,799 to 2,763,602
Atu2761
Atu2762: Atu2762 - hypothetical protein, at 2,763,618 to 2,764,073
Atu2762
Atu2763: Atu2763 - two component response regulator, at 2,764,213 to 2,764,896
Atu2763
Atu2764: Atu2764 - hypothetical protein, at 2,765,173 to 2,765,583
Atu2764
Atu2765: Atu2765 - transcriptional regulator, CarD family, at 2,765,656 to 2,766,225
Atu2765
Position (kb)
2764
2765 Strain fitness (log2 ratio)
-1
0
1 at 2763.376 kb on - strand, within Atu2761 at 2763.399 kb on - strand, within Atu2761 at 2763.493 kb on - strand, within Atu2761 at 2763.756 kb on - strand, within Atu2762 at 2763.855 kb on + strand, within Atu2762 at 2763.865 kb on + strand, within Atu2762 at 2763.888 kb on - strand, within Atu2762 at 2763.978 kb on - strand, within Atu2762 at 2764.042 kb on - strand at 2764.042 kb on - strand at 2764.049 kb on + strand at 2764.062 kb on + strand at 2764.075 kb on - strand at 2765.100 kb on - strand at 2765.131 kb on + strand at 2765.183 kb on - strand at 2765.216 kb on + strand, within Atu2764 at 2765.224 kb on - strand, within Atu2764 at 2765.302 kb on - strand, within Atu2764 at 2765.327 kb on - strand, within Atu2764 at 2765.343 kb on + strand, within Atu2764 at 2765.343 kb on + strand, within Atu2764 at 2765.343 kb on + strand, within Atu2764 at 2765.343 kb on + strand, within Atu2764 at 2765.351 kb on - strand, within Atu2764 at 2765.351 kb on - strand, within Atu2764 at 2765.403 kb on + strand, within Atu2764 at 2765.403 kb on + strand, within Atu2764 at 2765.403 kb on + strand, within Atu2764 at 2765.408 kb on + strand, within Atu2764 at 2765.426 kb on - strand, within Atu2764 at 2765.577 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phage 95.3 + bacteria remove 2,763,376 - Atu2761 0.72 +0.0 2,763,399 - Atu2761 0.75 +0.3 2,763,493 - Atu2761 0.86 +0.1 2,763,756 - Atu2762 0.30 +0.9 2,763,855 + Atu2762 0.52 +1.4 2,763,865 + Atu2762 0.54 -0.1 2,763,888 - Atu2762 0.59 +1.0 2,763,978 - Atu2762 0.79 -0.8 2,764,042 - -0.6 2,764,042 - +0.5 2,764,049 + -0.4 2,764,062 + +0.3 2,764,075 - -0.0 2,765,100 - +0.8 2,765,131 + -1.2 2,765,183 - +0.6 2,765,216 + Atu2764 0.10 -1.5 2,765,224 - Atu2764 0.12 -0.1 2,765,302 - Atu2764 0.31 +0.6 2,765,327 - Atu2764 0.37 +0.1 2,765,343 + Atu2764 0.41 +1.1 2,765,343 + Atu2764 0.41 -0.2 2,765,343 + Atu2764 0.41 +0.1 2,765,343 + Atu2764 0.41 +0.4 2,765,351 - Atu2764 0.43 -0.6 2,765,351 - Atu2764 0.43 -0.0 2,765,403 + Atu2764 0.56 +0.0 2,765,403 + Atu2764 0.56 +0.4 2,765,403 + Atu2764 0.56 -0.5 2,765,408 + Atu2764 0.57 -0.2 2,765,426 - Atu2764 0.62 +0.1 2,765,577 + +0.6
Or see this region's nucleotide sequence