Strain Fitness in Pseudomonas simiae WCS417 around PS417_04755

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
1,054,290	+		PS417_04745	0.71	-2.9
1,054,290	+				-2.0
1,054,291	-		PS417_04745	0.71	-1.3
1,054,299	-		PS417_04745	0.72	-1.0
1,054,309	-		PS417_04745	0.72	-1.8
1,054,309	-		PS417_04745	0.72	-1.3
1,054,937	-		PS417_04750	0.15	-1.4
1,054,937	-		PS417_04750	0.15	-0.6
1,054,937	-		PS417_04750	0.15	-1.2
1,054,937	-		PS417_04750	0.15	-1.4
1,054,937	-		PS417_04750	0.15	-1.0
1,054,938	+		PS417_04750	0.16	-1.6
1,054,938	+		PS417_04750	0.16	-2.6
1,054,938	+		PS417_04750	0.16	-1.0
1,054,939	-		PS417_04750	0.16	+0.4
1,054,939	-		PS417_04750	0.16	-1.3
1,055,173	+				-1.6
1,055,198	+				+3.1
1,055,198	+				-1.2
1,055,198	+				-2.0
1,055,199	-				-2.0
1,055,517	-		PS417_04755	0.46	-0.7
1,055,594	+		PS417_04755	0.55	-1.3
1,055,594	+		PS417_04755	0.55	-2.7
1,055,595	-		PS417_04755	0.56	-1.8
1,055,595	-		PS417_04755	0.56	-1.4
1,055,595	-		PS417_04755	0.56	-1.0
1,055,628	-		PS417_04755	0.59	-0.3
1,055,801	+		PS417_04755	0.79	-1.7
1,055,802	-		PS417_04755	0.80	-0.9
1,055,802	-		PS417_04755	0.80	+0.0
1,055,802	-		PS417_04755	0.80	-1.5
1,055,996	+				-0.0
1,056,055	-		PS417_04760	0.17	+0.1
1,056,055	-		PS417_04760	0.17	-0.8
1,056,109	+		PS417_04760	0.31	-0.1
1,056,110	-		PS417_04760	0.31	-0.2
1,056,110	-		PS417_04760	0.31	-0.1
1,056,377	-				+0.5
1,056,423	-				-0.2
1,056,716	+		PS417_04765	0.28	-0.2
1,056,716	+		PS417_04765	0.28	-0.3
1,056,717	-		PS417_04765	0.28	+0.0
1,056,909	-		PS417_04765	0.44	+1.4
1,056,927	+		PS417_04765	0.46	+0.3
1,056,928	-		PS417_04765	0.46	-0.6