Strain Fitness in Pseudomonas simiae WCS417 around PS417_04740

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
1,050,208	-		PS417_04735	0.15	-2.7
1,050,240	+		PS417_04735	0.19	-1.7
1,050,240	+		PS417_04735	0.19	-0.1
1,050,241	-		PS417_04735	0.19	-1.2
1,050,241	-		PS417_04735	0.19	-1.5
1,050,513	+		PS417_04735	0.47	-1.4
1,050,540	+		PS417_04735	0.50	-1.7
1,050,540	+		PS417_04735	0.50	-2.3
1,050,544	+		PS417_04735	0.50	-1.0
1,050,545	-		PS417_04735	0.50	-1.6
1,050,545	-		PS417_04735	0.50	-0.2
1,050,545	-		PS417_04735	0.50	-1.1
1,050,834	+		PS417_04735	0.80	+0.4
1,050,835	-		PS417_04735	0.80	-2.7
1,051,010	-				-1.4
1,051,088	-				-0.7
1,051,139	+				-1.3
1,051,139	+				-1.0
1,051,140	-				-1.7
1,051,176	+				-1.4
1,051,586	+		PS417_04740	0.25	-1.0
1,051,772	+		PS417_04740	0.37	-1.8
1,051,773	-		PS417_04740	0.37	+0.3
1,051,773	-		PS417_04740	0.37	-3.5
1,052,204	+		PS417_04740	0.66	-1.6
1,052,204	+		PS417_04740	0.66	+0.0
1,052,204	+		PS417_04740	0.66	+0.5
1,052,258	+		PS417_04740	0.69	-0.4
1,052,258	+		PS417_04740	0.69	-1.4
1,052,258	+		PS417_04740	0.69	-1.8
1,052,259	-		PS417_04740	0.70	-1.8
1,052,340	-		PS417_04740	0.75	-0.8
1,052,360	+		PS417_04740	0.76	-1.8
1,052,721	+				-1.1
1,052,722	-				-2.1
1,052,826	+				-0.7
1,052,826	+				-1.3
1,052,827	-				-1.6
1,052,827	-				-1.5
1,052,827	-				-1.0
1,052,827	-				-1.1
1,052,828	+				-1.7
1,052,828	+				-0.5
1,052,829	-				+0.6
1,052,829	-				-0.2
1,053,141	-		PS417_04745	0.19	-2.3
1,053,684	+		PS417_04745	0.44	-2.0
1,053,684	+		PS417_04745	0.44	-0.8
1,053,684	+		PS417_04745	0.44	-1.1