Strain Fitness in Pseudomonas simiae WCS417 around PS417_22990

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
4,977,179	-		PS417_22985	0.32	-0.9
4,977,195	+		PS417_22985	0.33	+0.1
4,977,195	+		PS417_22985	0.33	-0.6
4,977,228	-		PS417_22985	0.36	-0.1
4,977,228	-		PS417_22985	0.36	+0.5
4,977,391	-		PS417_22985	0.51	-0.2
4,977,391	-		PS417_22985	0.51	+0.3
4,977,444	+		PS417_22985	0.56	+0.3
4,977,444	+		PS417_22985	0.56	+0.1
4,977,445	-		PS417_22985	0.56	-0.1
4,977,445	-		PS417_22985	0.56	-0.5
4,977,445	-		PS417_22985	0.56	-0.3
4,977,446	+		PS417_22985	0.56	-0.7
4,977,639	+		PS417_22985	0.73	-2.4
4,977,682	+		PS417_22985	0.77	+0.1
4,977,895	+				-0.0
4,978,109	+		PS417_22990	0.19	+0.4
4,978,110	-		PS417_22990	0.19	-0.7
4,978,667	-		PS417_22990	0.73	-2.9
4,978,852	+				-0.4
4,978,853	-				+0.0
4,978,974	+				-0.3
4,978,974	+				-0.1
4,978,975	-				+0.6
4,979,078	+				-0.5
4,979,078	+				+0.5
4,979,079	-				-0.1
4,979,079	-				-0.5
4,979,079	-				-0.2
4,979,109	+				-0.7
4,979,659	+		PS417_22995	0.28	+0.4
4,979,933	-		PS417_22995	0.38	-0.1