Strain Fitness in Pseudomonas simiae WCS417 around PS417_20265

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
4,400,122	+		PS417_20260	0.51	+0.1
4,400,213	+		PS417_20260	0.56	-0.0
4,400,221	+		PS417_20260	0.56	-1.5
4,400,221	+		PS417_20260	0.56	-0.1
4,400,221	+		PS417_20260	0.56	+0.5
4,400,227	+		PS417_20260	0.57	+1.5
4,400,227	+		PS417_20260	0.57	+0.1
4,400,227	+		PS417_20260	0.57	-0.2
4,400,228	-		PS417_20260	0.57	+0.9
4,400,228	-		PS417_20260	0.57	-0.4
4,400,368	+		PS417_20260	0.65	-0.1
4,400,368	+		PS417_20260	0.65	-0.0
4,400,368	+		PS417_20260	0.65	-1.3
4,400,368	+		PS417_20260	0.65	+0.7
4,400,368	+		PS417_20260	0.65	-1.1
4,400,368	+		PS417_20260	0.65	-0.2
4,400,369	-		PS417_20260	0.65	-0.6
4,400,446	+		PS417_20260	0.70	-0.3
4,400,447	-		PS417_20260	0.70	+0.4
4,400,447	-				+1.5
4,400,465	-		PS417_20260	0.71	+0.4
4,400,465	-		PS417_20260	0.71	+0.1
4,400,548	+		PS417_20260	0.76	-1.2
4,400,940	-				+0.5
4,400,999	+				-0.1
4,401,315	-		PS417_20265	0.57	-1.1
4,401,398	+		PS417_20265	0.79	-2.3
4,401,398	+		PS417_20265	0.79	-0.3
4,401,399	-		PS417_20265	0.79	-0.0
4,401,399	-		PS417_20265	0.79	-0.8
4,401,470	+				+0.2
4,401,471	-				-0.3
4,401,471	-				+0.2
4,401,510	+				+0.2
4,401,915	+				-2.1
4,401,961	+				-0.7