Strain Fitness in Pseudomonas simiae WCS417 around PS417_00160

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
32,940	+				-0.1
32,942	+				+1.3
33,028	+				+1.0
33,028	+				-0.3
33,029	-				-0.2
33,030	+				+2.6
33,297	+		PS417_00155	0.33	+0.9
33,298	-		PS417_00155	0.33	-0.8
33,483	+		PS417_00155	0.53	+0.1
33,499	-		PS417_00155	0.54	+0.0
33,713	-		PS417_00155	0.77	-0.4
34,080	-				+0.3
34,426	+		PS417_00160	0.79	-0.7
34,427	-		PS417_00160	0.79	-0.8
34,427	-		PS417_00160	0.79	-0.4
34,427	-		PS417_00160	0.79	-1.1
34,492	+		PS417_00160	0.89	+1.3
34,529	+				-0.2
34,530	-				-0.1
34,530	-				-0.4
34,591	-				+0.1
34,591	-				-0.5
34,591	-				+0.0
34,592	+				-0.2
34,602	-				-0.0
34,758	-		PS417_00165	0.13	+1.0
34,955	+		PS417_00165	0.30	-0.5
35,213	+		PS417_00165	0.53	-0.5
35,213	+		PS417_00165	0.53	-0.1
35,213	+		PS417_00165	0.53	+0.1
35,214	-		PS417_00165	0.53	-0.4
35,214	-		PS417_00165	0.53	-1.5
35,357	+		PS417_00165	0.65	+0.0
35,438	+		PS417_00165	0.72	+0.9
35,516	+		PS417_00165	0.79	-0.6
35,517	-		PS417_00165	0.79	-1.1
35,517	-		PS417_00165	0.79	-1.8
35,517	-		PS417_00165	0.79	-1.3