Strain Fitness in Pseudomonas simiae WCS417 around PS417_14775

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
3,228,241	+				-0.2
3,228,351	+				+0.4
3,228,380	+		PS417_14770	0.11	-0.2
3,228,408	-		PS417_14770	0.14	+0.6
3,228,477	-		PS417_14770	0.22	+0.4
3,228,722	+		PS417_14770	0.49	-0.5
3,228,785	+		PS417_14770	0.55	-0.7
3,228,785	+		PS417_14770	0.55	+0.1
3,228,785	+		PS417_14770	0.55	+0.4
3,228,786	-		PS417_14770	0.55	+0.6
3,228,797	+		PS417_14770	0.57	-0.5
3,228,797	+		PS417_14770	0.57	+0.3
3,228,848	+		PS417_14770	0.62	+0.1
3,228,968	+		PS417_14770	0.75	-0.2
3,229,103	+		PS417_14770	0.90	-0.4
3,229,234	+				+0.5
3,229,297	+				-0.5
3,229,331	-				-1.1
3,229,360	+				-0.3
3,229,361	-				+1.4
3,229,661	-		PS417_14775	0.30	-0.4
3,229,661	-		PS417_14775	0.30	+0.2
3,229,661	-		PS417_14775	0.30	-0.6
3,229,709	-		PS417_14775	0.34	-0.8
3,229,709	-		PS417_14775	0.34	+0.4
3,229,768	+				-0.7
3,229,768	+		PS417_14775	0.38	-0.8
3,229,849	+		PS417_14775	0.44	-0.4
3,229,850	-		PS417_14775	0.44	-0.9
3,230,165	-				+3.1
3,230,368	+		PS417_14775	0.81	-2.1
3,230,590	-				-0.3
3,230,658	+				-0.3
3,230,658	+				-0.1
3,230,662	+				-0.1
3,230,669	+				+0.9
3,230,670	-				+0.0
3,230,706	+				+0.0
3,230,707	-				+0.6
3,231,037	+		PS417_14780	0.48	+0.7
3,231,084	-		PS417_14780	0.57	+0.6
3,231,084	-		PS417_14780	0.57	-0.1
3,231,084	-		PS417_14780	0.57	+0.8
3,231,084	-		PS417_14780	0.57	-0.2
3,231,161	-		PS417_14780	0.72	-0.2
3,231,378	+				-0.4
3,231,378	+				-0.4
3,231,451	+				-0.7
3,231,452	-				-1.9
3,231,472	-				-0.1
3,231,596	+				+0.1
3,231,611	+				+0.0
3,231,611	+				+1.4
3,231,612	-				-0.9