Strain Fitness in Pseudomonas simiae WCS417 around PS417_10065

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
2,159,154	-		PS417_10060	0.43	-0.4
2,159,234	+		PS417_10060	0.75	+0.1
2,159,235	-				+2.6
2,159,394	-				-0.2
2,159,422	+				-0.9
2,159,422	+				-1.0
2,159,423	-				-1.0
2,159,423	-				-0.8
2,159,477	+				-0.3
2,159,477	+				+0.3
2,159,477	+				+0.4
2,159,478	-				+0.8
2,159,478	-				-0.1
2,159,478	-				+0.8
2,159,478	-				+0.6
2,159,481	+				-0.2
2,159,521	-				-0.5
2,159,616	+				+0.3
2,159,617	-				-0.6
2,159,617	-				+1.4
2,159,634	+				-0.1
2,159,742	+				+0.6
2,159,743	-				+0.0
2,159,743	-				-0.1
2,159,814	+				-0.9
2,159,815	-				-0.2
2,159,815	-				+0.4
2,159,828	-				-0.3
2,159,859	+				+0.1
2,159,859	+				+0.7
2,159,859	+				-0.1
2,159,859	+				-0.1
2,159,859	+				-0.7
2,159,876	+				-0.7
2,159,923	-				-0.4
2,160,084	+				-0.7
2,160,084	+		PS417_10065	0.21	+0.7
2,160,110	+		PS417_10065	0.25	-2.2
2,160,350	-		PS417_10065	0.63	-0.3
2,160,350	-		PS417_10065	0.63	+0.2
2,160,376	+				-0.1
2,160,376	+		PS417_10065	0.67	-0.1
2,160,377	-		PS417_10065	0.67	-1.5
2,160,377	-		PS417_10065	0.67	-0.7
2,160,377	-		PS417_10065	0.67	-1.3
2,160,593	-				+0.1
2,160,642	+				-0.7
2,160,912	+		PS417_10070	0.65	-0.1
2,160,913	-		PS417_10070	0.66	-0.0
2,160,967	+		PS417_10070	0.77	-0.2
2,160,967	+		PS417_10070	0.77	-0.3
2,160,967	+		PS417_10070	0.77	-0.8
2,160,967	+		PS417_10070	0.77	-0.2
2,160,968	-		PS417_10070	0.77	+0.1
2,160,968	-		PS417_10070	0.77	-0.4
2,161,070	-				-0.1
2,161,198	+		PS417_10075	0.11	-0.1
2,161,208	+		PS417_10075	0.12	-0.1
2,161,208	+		PS417_10075	0.12	+0.1
2,161,223	+		PS417_10075	0.13	-0.4
2,161,326	-		PS417_10075	0.21	-0.1
2,161,326	-		PS417_10075	0.21	-0.1
2,161,526	-		PS417_10075	0.36	+0.2