Strain Fitness in Pseudomonas simiae WCS417 around PS417_06045

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
1,340,687	+				+0.7
1,340,800	-				+0.1
1,340,800	-				+0.3
1,340,800	-				+0.1
1,340,800	-				-0.1
1,340,800	-				+0.7
1,340,802	-				+0.2
1,340,810	+				+1.3
1,340,915	+		PS417_06035	0.33	+1.2
1,340,927	+		PS417_06035	0.36	+0.8
1,341,201	-				-0.5
1,341,201	-				-0.1
1,341,288	+				+0.5
1,341,289	-				-0.8
1,341,289	-				-1.8
1,341,300	-				+0.1
1,341,314	+				-0.1
1,341,314	+				+0.5
1,341,318	+				+0.2
1,341,318	+				+2.1
1,341,319	-				-0.0
1,341,340	+				+0.1
1,341,388	+		PS417_06040	0.28	+0.2
1,341,388	+		PS417_06040	0.28	-0.7
1,341,389	-		PS417_06040	0.29	-0.4
1,341,417	+		PS417_06040	0.43	+0.0
1,341,526	-				-0.1
1,341,707	-		PS417_06045	0.19	-0.7
1,341,775	-		PS417_06045	0.28	-0.2
1,342,105	-		PS417_06045	0.70	-0.7
1,342,336	+				+0.1
1,342,399	+				+0.5
1,342,828	+				-0.5
1,343,073	+				-2.5
1,343,186	-		PS417_06055	0.27	-2.7
1,343,236	+		PS417_06055	0.41	+0.0
1,343,236	+		PS417_06055	0.41	-0.4
1,343,237	-		PS417_06055	0.41	+0.0
1,343,315	-		PS417_06055	0.64	-0.9
1,343,315	-		PS417_06055	0.64	-0.0
1,343,315	-		PS417_06055	0.64	-0.4