Strain Fitness in Pseudomonas simiae WCS417 around PS417_04725

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
1,047,026	-		PS417_04715	0.57	+0.2
1,047,055	+				-0.4
1,047,367	+				-0.3
1,047,367	+				-0.9
1,047,367	+				-1.8
1,047,368	-				-0.0
1,047,368	-				-0.1
1,047,440	-				+0.0
1,047,467	+				-0.5
1,047,468	-				+0.5
1,047,468	-				-0.1
1,047,470	+				+0.1
1,047,470	+				-1.2
1,047,470	+				+0.0
1,047,471	-				-0.6
1,047,471	-				+0.0
1,047,471	-				+0.4
1,047,471	-				+0.3
1,047,507	+		PS417_04720	0.11	-1.3
1,047,508	-		PS417_04720	0.11	-0.5
1,047,982	-				-1.3
1,048,085	+		PS417_04725	0.17	+0.3
1,048,085	+		PS417_04725	0.17	-0.3
1,048,085	+		PS417_04725	0.17	+0.9
1,048,086	-		PS417_04725	0.17	+0.0
1,048,423	+		PS417_04725	0.54	+0.5
1,048,423	+		PS417_04725	0.54	-0.1
1,048,546	+		PS417_04725	0.68	+1.6
1,048,546	+		PS417_04725	0.68	+1.9
1,048,546	+		PS417_04725	0.68	+0.2
1,048,547	-		PS417_04725	0.68	-0.0
1,048,789	-				+0.5
1,048,831	-				+1.0
1,048,868	+				-0.2
1,048,868	+				-0.4
1,048,868	+				-0.4
1,048,868	+				-0.4
1,048,868	+				+0.7
1,048,869	-				+0.5
1,048,869	-				-0.4
1,048,869	-				+0.5
1,048,869	-				-1.3
1,048,869	-				-0.4
1,049,147	+		PS417_04730	0.19	-0.0
1,049,147	+		PS417_04730	0.19	+0.2
1,049,147	+		PS417_04730	0.19	-0.1
1,049,147	+		PS417_04730	0.19	+0.4
1,049,148	-		PS417_04730	0.19	+0.5
1,049,696	+		PS417_04730	0.75	-0.2
1,049,696	+		PS417_04730	0.75	+0.0
1,049,696	+		PS417_04730	0.75	+0.9
1,049,697	-		PS417_04730	0.76	-0.1
1,049,697	-		PS417_04730	0.76	+0.4
1,049,752	+		PS417_04730	0.81	-0.1
1,049,753	-		PS417_04730	0.81	+0.8