Strain Fitness in Pseudomonas simiae WCS417 around PS417_03940

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
879,022	+		PS417_03930	0.84	-0.1
879,023	-		PS417_03930	0.84	-0.2
879,186	+				-0.0
879,187	-				+0.4
879,187	-				-0.5
879,187	-				-0.1
879,187	-				+1.3
879,187	-				+0.2
879,187	-				-0.2
879,187	-				-0.2
879,187	-				+0.0
879,414	+				-0.1
879,520	-		PS417_03935	0.19	+1.6
879,604	+		PS417_03935	0.34	-0.3
879,604	+		PS417_03935	0.34	+1.2
879,626	+		PS417_03935	0.37	+2.0
879,626	+		PS417_03935	0.37	+1.8
879,626	+		PS417_03935	0.37	+1.2
879,627	-		PS417_03935	0.38	+0.6
880,003	+				-0.4
880,136	-		PS417_03940	0.19	-1.3
880,136	-		PS417_03940	0.19	-0.3
880,139	-		PS417_03940	0.20	-0.0
880,231	-		PS417_03940	0.31	-1.2
880,231	-		PS417_03940	0.31	-0.2
880,231	-		PS417_03940	0.31	+1.0
880,231	-				-1.2
880,492	-		PS417_03940	0.62	-1.9
880,817	+				-1.9
880,831	+				-0.3
880,832	-				+0.3
880,832	-				-0.2
880,861	+				-1.0
880,861	+				-0.1
880,862	-				+0.1
880,862	-				-0.7
880,863	+				-0.2
880,863	+				+0.3
880,863	+				+0.2
880,863	+				-0.2
880,864	-				+0.4
880,864	-				+0.4
880,864	-				+0.2
880,864	-				+0.1
880,864	-				+0.3
880,919	+				-0.0
881,033	+				+0.8
881,034	-				+0.0
881,034	-				-0.5
881,034	-				+0.8
881,036	+				-1.0
881,037	-				+0.6
881,037	-				+0.8
881,037	-				-0.8