Strain Fitness in Pseudomonas simiae WCS417 around PS417_20635
Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X |
---|---|---|---|---|---|
remove | |||||
4,485,078 | - | PS417_20635 | 0.90 | -0.8 | |
4,485,972 | + | -0.6 | |||
4,486,001 | - | -0.2 | |||
4,486,050 | - | -0.3 | |||
4,486,085 | - | -1.2 | |||
4,486,085 | - | -0.4 | |||
4,486,085 | - | +0.2 | |||
4,486,085 | - | -0.5 | |||
4,486,085 | - | -0.5 | |||
4,486,085 | - | -0.1 | |||
4,486,085 | - | -0.6 | |||
4,486,089 | - | -0.0 | |||
4,486,089 | - | -0.2 | |||
4,486,121 | - | -0.2 | |||
4,486,166 | + | -0.4 | |||
4,486,168 | + | -0.5 | |||
4,486,169 | - | -0.6 | |||
4,486,169 | - | -0.8 | |||
4,486,169 | - | -0.9 |
Or see this region's nucleotide sequence