Strain Fitness in Pseudomonas simiae WCS417 around PS417_19935

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
4,327,386	+				-0.1
4,327,389	-				-0.4
4,327,393	+				-0.0
4,327,393	+				-0.2
4,327,414	-				+0.0
4,327,512	+				-0.2
4,327,513	-				-0.1
4,327,513	-				-0.5
4,327,632	-		PS417_19930	0.41	+0.1
4,327,719	+		PS417_19930	0.72	+0.1
4,327,720	-		PS417_19930	0.72	-0.2
4,327,720	-		PS417_19930	0.72	-0.2
4,327,847	+				-0.6
4,327,893	+				-1.2
4,327,941	-		PS417_19935	0.35	-1.2
4,328,034	-		PS417_19935	0.68	-0.4
4,328,092	+		PS417_19935	0.88	-1.0
4,328,093	-		PS417_19935	0.88	-1.2
4,328,093	-		PS417_19935	0.88	+0.4
4,328,126	+				-1.3
4,328,126	+				-0.3
4,328,173	-				+0.2
4,328,174	+				+0.9
4,328,174	+				+0.2
4,328,175	-				-0.0
4,328,200	-				-0.7
4,328,672	+		PS417_19940	0.21	+0.0
4,328,672	+		PS417_19940	0.21	-0.0
4,328,672	+		PS417_19940	0.21	-0.3
4,328,673	-		PS417_19940	0.21	-0.3
4,328,768	-		PS417_19940	0.25	+0.7
4,328,960	-		PS417_19940	0.34	+0.1