Strain Fitness in Pseudomonas simiae WCS417 around PS417_19240

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
4,175,351	+		PS417_19235	0.48	-1.4
4,175,398	-		PS417_19235	0.50	-0.3
4,175,425	-		PS417_19235	0.52	+1.0
4,175,428	+		PS417_19235	0.52	-1.3
4,175,429	-		PS417_19235	0.52	+0.2
4,176,162	-				-0.4
4,176,317	+				-0.1
4,176,389	+				-1.2
4,176,792	-		PS417_19240	0.43	-0.0
4,177,103	+		PS417_19240	0.69	-0.9
4,177,104	-		PS417_19240	0.69	-1.4
4,177,104	-		PS417_19240	0.69	-0.9
4,177,273	+		PS417_19240	0.83	+0.8
4,177,320	-		PS417_19240	0.87	+0.5
4,177,320	-		PS417_19240	0.87	-1.7
4,177,495	+				-1.6
4,177,496	-				+0.2
4,177,496	-				+0.1
4,177,528	-				-0.1
4,177,904	+				+0.9
4,177,905	-				-1.1
4,177,905	-				-0.5
4,177,909	-				-0.2
4,178,058	+				+0.3
4,178,059	-				+0.0
4,178,059	-				-0.6
4,178,087	+				-0.1
4,178,087	+				+0.5
4,178,159	-				-0.4
4,178,252	-		PS417_19255	0.19	+0.4
4,178,257	+		PS417_19255	0.20	-0.1
4,178,257	+		PS417_19255	0.20	-1.1
4,178,257	+		PS417_19255	0.20	+0.8
4,178,258	-		PS417_19255	0.20	-0.8
4,178,464	+		PS417_19255	0.45	+0.6
4,178,465	-		PS417_19255	0.45	+0.5