Strain Fitness in Pseudomonas simiae WCS417 around PS417_10435

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
2,227,840	-		PS417_10425	0.84	-0.6
2,227,957	+				-0.3
2,227,958	-				+0.3
2,227,979	-				-0.7
2,228,066	+				-0.0
2,228,296	-		PS417_10430	0.46	+0.4
2,228,304	-		PS417_10430	0.48	-1.0
2,228,554	-				-0.7
2,228,554	-				+0.2
2,228,554	-				-0.0
2,228,569	-				-0.1
2,228,689	-				+0.2
2,228,761	-				-0.5
2,229,004	+		PS417_10435	0.30	+0.1
2,229,568	-		PS417_10435	0.76	-0.1
2,229,626	+		PS417_10435	0.81	+0.5
2,229,627	-		PS417_10435	0.81	-0.4
2,229,943	+				-0.2
2,230,268	-		PS417_10440	0.16	-0.6
2,230,268	-				+1.3
2,230,528	-		PS417_10440	0.38	-2.1
2,230,543	-		PS417_10440	0.39	-0.9
2,230,616	-		PS417_10440	0.46	+0.9
2,230,744	+		PS417_10440	0.57	+0.4
2,230,745	-		PS417_10440	0.57	-0.1
2,230,745	-		PS417_10440	0.57	-0.1
2,230,750	+		PS417_10440	0.57	+0.3