Strain Fitness in Pseudomonas simiae WCS417 around PS417_09045

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
1,968,182	-		PS417_09040	0.30	-0.3
1,968,281	+		PS417_09040	0.39	+0.1
1,968,452	+		PS417_09040	0.55	-0.5
1,968,452	+		PS417_09040	0.55	-0.2
1,968,453	-		PS417_09040	0.55	+0.9
1,968,455	+		PS417_09040	0.55	-2.1
1,968,671	+		PS417_09040	0.76	-0.2
1,968,671	+		PS417_09040	0.76	+0.6
1,968,672	-		PS417_09040	0.76	+1.1
1,968,678	-		PS417_09040	0.76	-0.3
1,968,863	+				+0.6
1,968,863	+				+0.1
1,969,327	-		PS417_09045	0.32	-0.5
1,969,454	-		PS417_09045	0.45	-0.1
1,969,454	-		PS417_09045	0.45	-1.2
1,969,647	-		PS417_09045	0.63	-0.4
1,969,777	+		PS417_09045	0.76	-0.5
1,970,053	-				+0.7
1,970,053	-				-0.3
1,970,425	+		PS417_09050	0.52	-0.3
1,970,425	+		PS417_09050	0.52	+0.0
1,970,425	+				+2.8
1,970,425	+		PS417_09050	0.52	+0.1
1,970,425	+		PS417_09050	0.52	-0.5
1,970,425	+		PS417_09050	0.52	-0.2
1,970,425	+		PS417_09050	0.52	-0.2
1,970,426	-		PS417_09050	0.53	+0.2
1,970,426	-		PS417_09050	0.53	+0.1
1,970,426	-		PS417_09050	0.53	-0.1
1,970,426	-		PS417_09050	0.53	+0.6
1,970,426	-		PS417_09050	0.53	+0.5
1,970,426	-		PS417_09050	0.53	+0.1
1,970,426	-		PS417_09050	0.53	-0.2
1,970,426	-		PS417_09050	0.53	-1.4
1,970,426	-		PS417_09050	0.53	-0.3
1,970,427	+		PS417_09050	0.53	+0.9
1,970,427	+		PS417_09050	0.53	-0.4
1,970,428	-		PS417_09050	0.53	-0.6
1,970,428	-		PS417_09050	0.53	+0.3
1,970,428	-		PS417_09050	0.53	+0.5
1,970,428	-		PS417_09050	0.53	-0.2
1,970,428	-				+1.9
1,970,914	-				+0.5
1,970,914	-				-0.9
1,970,965	+				-0.5
1,970,969	+				-0.0
1,970,969	+				+0.3
1,971,006	+				+0.8