Strain Fitness in Pseudomonas simiae WCS417 around PS417_05300

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
1,175,237	+		PS417_05295	0.71	+0.1
1,175,237	+		PS417_05295	0.71	+0.1
1,175,237	+		PS417_05295	0.71	-0.2
1,175,237	+		PS417_05295	0.71	-0.4
1,175,237	+		PS417_05295	0.71	+0.3
1,175,237	+		PS417_05295	0.71	+0.8
1,175,238	-		PS417_05295	0.71	+1.3
1,175,238	-		PS417_05295	0.71	+0.1
1,175,936	+				-0.5
1,176,006	+				-0.6
1,176,007	-				-0.4
1,176,060	+				-0.4
1,176,061	-				-0.2
1,176,061	-				-0.1
1,176,084	+				-0.6
1,176,084	+				-0.8
1,176,085	-				-0.1
1,176,157	-				-0.2
1,176,232	+		PS417_05300	0.11	-0.2
1,176,335	+		PS417_05300	0.15	-0.5
1,176,336	-		PS417_05300	0.15	-0.9
1,176,507	+		PS417_05300	0.22	-0.5
1,176,507	+		PS417_05300	0.22	-1.4
1,176,508	-		PS417_05300	0.22	-0.3
1,176,508	-		PS417_05300	0.22	-0.8
1,176,840	+		PS417_05300	0.36	-0.9
1,176,840	+		PS417_05300	0.36	-0.1
1,176,840	+		PS417_05300	0.36	-0.7
1,176,840	+		PS417_05300	0.36	-0.7
1,176,840	+		PS417_05300	0.36	-1.0
1,176,840	+		PS417_05300	0.36	-0.1
1,177,018	-		PS417_05300	0.43	-1.3
1,177,018	-		PS417_05300	0.43	-0.7
1,177,083	+		PS417_05300	0.46	-0.3
1,177,146	+		PS417_05300	0.48	+0.4
1,177,146	+		PS417_05300	0.48	-0.7
1,177,147	-		PS417_05300	0.48	-1.0
1,177,147	-		PS417_05300	0.48	-0.4
1,177,332	+		PS417_05300	0.56	+0.9
1,177,332	+		PS417_05300	0.56	-1.0
1,177,332	+		PS417_05300	0.56	-0.5
1,177,335	+		PS417_05300	0.56	+0.9
1,177,692	+		PS417_05300	0.71	-0.2
1,177,692	+		PS417_05300	0.71	-1.0
1,177,693	-		PS417_05300	0.71	-0.1
1,177,693	-		PS417_05300	0.71	-1.0
1,177,693	-		PS417_05300	0.71	-0.7
1,177,849	-		PS417_05300	0.77	-1.0
1,177,864	-		PS417_05300	0.78	-0.0
1,177,916	+		PS417_05300	0.80	-0.8
1,177,917	-		PS417_05300	0.80	+0.1
1,178,357	+				-0.1
1,178,395	+				-0.9
1,178,395	+				-0.3
1,178,395	+				-0.9
1,178,396	-				-0.7
1,178,396	-				-0.7
1,178,422	+				+0.1
1,178,422	+				-0.7
1,178,422	+				-1.0
1,178,423	-				+0.5
1,178,447	+				-0.4
1,178,447	+				-0.9
1,178,448	-				-0.2
1,178,501	+				-0.0
1,178,501	+				-0.8
1,178,501	+				+0.6
1,178,505	+				-0.1
1,178,505	+				-0.5
1,178,505	+				+0.3
1,178,506	-				+0.7
1,178,530	+				-0.6
1,178,778	-				-0.0
1,178,852	+				+1.0
1,178,852	+				-0.3
1,179,224	+		PS417_05305	0.22	+0.2
1,179,224	+		PS417_05305	0.22	+0.1
1,179,224	+		PS417_05305	0.22	-0.2
1,179,224	+		PS417_05305	0.22	-0.0
1,179,224	+		PS417_05305	0.22	+0.2
1,179,225	-		PS417_05305	0.22	+0.2
1,179,225	-		PS417_05305	0.22	-0.7
1,179,225	-		PS417_05305	0.22	-0.8
1,179,231	-		PS417_05305	0.23	-0.5
1,179,302	+		PS417_05305	0.26	-0.3
1,179,302	+		PS417_05305	0.26	-0.5
1,179,303	-		PS417_05305	0.26	+1.2
1,179,320	+		PS417_05305	0.27	-0.7
1,179,321	-		PS417_05305	0.27	-0.3
1,179,325	+		PS417_05305	0.27	-0.1