Strain Fitness in Pseudomonas simiae WCS417 around PS417_04740

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
1,050,208	-		PS417_04735	0.15	+4.7
1,050,240	+		PS417_04735	0.19	+4.2
1,050,240	+		PS417_04735	0.19	+3.9
1,050,241	-		PS417_04735	0.19	+4.7
1,050,241	-		PS417_04735	0.19	+4.1
1,050,513	+		PS417_04735	0.47	+4.2
1,050,540	+		PS417_04735	0.50	+3.9
1,050,540	+		PS417_04735	0.50	+5.4
1,050,544	+		PS417_04735	0.50	+3.7
1,050,545	-		PS417_04735	0.50	+0.2
1,050,545	-		PS417_04735	0.50	+5.0
1,050,545	-		PS417_04735	0.50	+2.7
1,050,834	+		PS417_04735	0.80	+2.3
1,050,835	-		PS417_04735	0.80	+3.9
1,051,010	-				+5.4
1,051,088	-				-1.1
1,051,139	+				+4.2
1,051,139	+				+3.6
1,051,140	-				-0.7
1,051,176	+				+3.3
1,051,586	+		PS417_04740	0.25	+3.0
1,051,772	+		PS417_04740	0.37	+3.0
1,051,773	-		PS417_04740	0.37	+1.5
1,051,773	-		PS417_04740	0.37	+3.0
1,052,204	+		PS417_04740	0.66	+2.7
1,052,204	+		PS417_04740	0.66	-0.3
1,052,204	+		PS417_04740	0.66	-0.2
1,052,258	+		PS417_04740	0.69	+2.8
1,052,258	+		PS417_04740	0.69	+2.2
1,052,258	+		PS417_04740	0.69	+1.4
1,052,259	-		PS417_04740	0.70	+0.1
1,052,340	-		PS417_04740	0.75	+3.6
1,052,360	+		PS417_04740	0.76	+2.2
1,052,721	+				+3.7
1,052,722	-				+2.9
1,052,826	+				+0.6
1,052,826	+				+1.2
1,052,827	-				+2.1
1,052,827	-				+2.1
1,052,827	-				+0.9
1,052,827	-				+1.8
1,052,828	+				+1.5
1,052,828	+				+1.6
1,052,829	-				+0.3
1,052,829	-				-0.3
1,053,141	-		PS417_04745	0.19	+2.5
1,053,684	+		PS417_04745	0.44	+1.1
1,053,684	+		PS417_04745	0.44	+0.3
1,053,684	+		PS417_04745	0.44	+0.1