Strain Fitness in Pseudomonas simiae WCS417 around PS417_04685

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
1,037,863	+		PS417_04680	0.44	+1.3
1,037,863	+		PS417_04680	0.44	+0.1
1,037,863	+		PS417_04680	0.44	-1.1
1,037,863	+		PS417_04680	0.44	+0.0
1,037,863	+		PS417_04680	0.44	-0.4
1,037,863	+		PS417_04680	0.44	+1.3
1,037,863	+		PS417_04680	0.44	+0.3
1,037,864	-		PS417_04680	0.44	+0.5
1,037,864	-		PS417_04680	0.44	-0.7
1,037,864	-		PS417_04680	0.44	+0.7
1,037,869	+		PS417_04680	0.45	+1.7
1,037,881	+		PS417_04680	0.46	-1.6
1,037,881	+		PS417_04680	0.46	+0.9
1,037,881	+		PS417_04680	0.46	+1.2
1,037,881	+				+0.4
1,037,882	-		PS417_04680	0.46	+0.9
1,037,882	-		PS417_04680	0.46	+1.5
1,037,884	+		PS417_04680	0.46	+1.6
1,037,884	+		PS417_04680	0.46	+1.0
1,037,884	+		PS417_04680	0.46	-0.5
1,037,888	-		PS417_04680	0.46	-0.5
1,038,046	+		PS417_04680	0.58	+0.2
1,038,047	-		PS417_04680	0.58	-0.6
1,038,376	+		PS417_04680	0.83	+2.1
1,038,463	+		PS417_04680	0.90	-0.3
1,038,463	+		PS417_04680	0.90	+0.2
1,038,464	-		PS417_04680	0.90	+1.0
1,038,712	+				-0.0
1,038,712	+				-0.3
1,038,712	+				+0.3
1,038,712	+				-2.0
1,038,713	-				-0.1
1,038,889	+				-1.9
1,039,082	+		PS417_04685	0.16	+1.6
1,039,083	-		PS417_04685	0.16	-2.2
1,039,413	+		PS417_04685	0.40	-0.1
1,039,414	-		PS417_04685	0.40	-1.1
1,039,527	+		PS417_04685	0.49	-3.3
1,039,528	-		PS417_04685	0.49	-0.2
1,039,944	+		PS417_04685	0.79	-2.3
1,039,945	-		PS417_04685	0.79	+1.3
1,039,950	+		PS417_04685	0.80	-1.6
1,039,950	+				+0.4
1,039,951	-		PS417_04685	0.80	+0.6
1,040,218	+				-0.2
1,040,218	+				-2.5
1,040,219	-				+0.0
1,040,245	+				-1.4
1,040,245	+				-3.2
1,040,245	+				-2.3
1,040,245	+				-3.6
1,040,246	-				-0.8
1,040,748	+		PS417_04690	0.78	-3.9
1,040,761	+		PS417_04690	0.80	-2.9
1,040,762	-		PS417_04690	0.80	-4.4
1,040,821	+		PS417_04690	0.89	-2.3
1,040,822	-		PS417_04690	0.89	-2.4
1,040,985	-				-1.0
1,040,990	+				-1.4
1,040,990	+				-0.7
1,040,990	+				-0.5
1,040,990	+				-0.8
1,040,991	-				-1.7
1,040,991	-				-0.0
1,040,991	-				-0.7
1,040,992	+				-0.5
1,040,993	-				-0.4
1,040,993	-				+0.2
1,041,174	-				-0.5