Strain Fitness in Pseudomonas simiae WCS417 around PS417_04665

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPS417_04660 and PS417_04665 are separated by 74 nucleotidesPS417_04665 and PS417_04670 are separated by 112 nucleotides PS417_04660: PS417_04660 - cell division protein FtsA, at 1,032,057 to 1,033,319 _04660 PS417_04665: PS417_04665 - cell division protein FtsZ, at 1,033,394 to 1,034,590 _04665 PS417_04670: PS417_04670 - UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase, at 1,034,703 to 1,035,614 _04670 Position (kb) 1033 1034 1035Strain fitness (log2 ratio) -1 0 1at 1035.588 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
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1,035,588 + +0.9

Or see this region's nucleotide sequence