Strain Fitness in Pseudomonas simiae WCS417 around PS417_28255

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
6,101,744	-		PS417_28245	0.77	-1.2
6,101,996	+				+0.0
6,102,013	+				+0.7
6,102,014	-				+0.6
6,102,015	+				+5.8
6,102,023	+				+2.9
6,102,023	+				+1.1
6,102,023	+				-2.1
6,102,023	+				+1.0
6,102,023	+				-1.2
6,102,024	-				-1.4
6,102,028	+				+1.0
6,102,029	-				-2.4
6,102,031	-				-0.7
6,102,041	+				+0.8
6,102,042	-				-0.1
6,102,042	-				-0.3
6,102,043	+				+1.1
6,102,044	-				+0.2
6,102,235	+		PS417_28250	0.39	-0.2
6,102,236	-		PS417_28250	0.39	-0.9
6,102,236	-		PS417_28250	0.39	-0.4
6,102,283	+		PS417_28250	0.51	+0.7
6,102,283	+		PS417_28250	0.51	+1.1
6,102,283	+		PS417_28250	0.51	-0.6
6,102,283	+		PS417_28250	0.51	-1.4
6,102,284	-		PS417_28250	0.51	-0.0
6,102,284	-		PS417_28250	0.51	-0.6
6,102,330	+		PS417_28250	0.62	-1.3
6,102,364	+		PS417_28250	0.71	+0.3
6,102,364	+		PS417_28250	0.71	-1.2
6,102,365	-		PS417_28250	0.71	-1.0
6,102,365	-		PS417_28250	0.71	-1.8
6,102,365	-		PS417_28250	0.71	-0.8
6,102,365	-		PS417_28250	0.71	-2.0
6,102,367	+		PS417_28250	0.71	-1.4
6,102,367	+		PS417_28250	0.71	-0.2
6,102,368	-		PS417_28250	0.72	-1.5
6,102,368	-		PS417_28250	0.72	-0.7
6,102,368	-		PS417_28250	0.72	-1.7
6,102,368	-		PS417_28250	0.72	-0.3
6,102,392	+		PS417_28250	0.77	-1.4
6,102,392	+		PS417_28250	0.77	-1.1
6,102,501	+				+0.5
6,102,563	-				-0.5
6,102,563	-				-2.3
6,102,652	+				-0.7
6,102,808	+		PS417_28255	0.17	+1.1
6,102,907	-		PS417_28255	0.23	-0.4
6,103,059	+		PS417_28255	0.32	+0.2
6,103,059	+		PS417_28255	0.32	+1.4
6,103,060	-		PS417_28255	0.32	+1.4
6,103,060	-		PS417_28255	0.32	-1.2
6,103,060	-		PS417_28255	0.32	-0.7
6,103,060	-		PS417_28255	0.32	+0.7
6,103,060	-		PS417_28255	0.32	+1.3
6,103,060	-		PS417_28255	0.32	-1.5
6,103,384	-		PS417_28255	0.50	+0.0
6,103,542	+		PS417_28255	0.59	+0.9
6,103,542	+		PS417_28255	0.59	+0.7
6,103,553	+		PS417_28255	0.60	+0.3
6,103,553	+		PS417_28255	0.60	+0.2
6,103,632	+		PS417_28255	0.64	+0.8
6,103,632	+		PS417_28255	0.64	+0.8
6,103,632	+		PS417_28255	0.64	+1.4
6,103,633	-		PS417_28255	0.64	+0.2
6,103,633	-		PS417_28255	0.64	-0.6
6,104,093	-				+0.1
6,104,093	-				+0.1
6,104,161	-				+1.5
6,104,161	-				+0.8
6,104,161	-				+0.1
6,104,161	-				-0.0
6,104,161	-				+0.3
6,104,161	-				+1.1
6,104,284	+				+0.6
6,104,359	+				-0.9
6,104,392	-				+0.4
6,104,425	+				+0.3
6,104,425	+				-0.3
6,104,425	+				+0.8
6,104,425	+				-1.2
6,104,426	-				+0.1
6,104,427	+				+0.3
6,104,428	-				-0.3
6,104,428	-				+0.9
6,104,428	-				-0.5
6,104,538	+				+0.3
6,104,539	-				-0.2
6,104,539	-				+0.1
6,104,556	+				-2.4
6,104,625	+		PS417_28260	0.14	+0.7
6,104,626	-		PS417_28260	0.14	+0.4
6,104,653	+		PS417_28260	0.20	-0.1
6,104,653	+		PS417_28260	0.20	+0.1
6,104,671	+		PS417_28260	0.24	-0.0
6,104,671	+		PS417_28260	0.24	-0.6
6,104,701	+		PS417_28260	0.30	+0.1
6,104,701	+		PS417_28260	0.30	-0.1
6,104,788	+		PS417_28260	0.48	+0.0
6,104,789	-		PS417_28260	0.49	-0.2
6,104,789	-		PS417_28260	0.49	+0.2
6,104,789	-		PS417_28260	0.49	+0.3
6,104,862	+		PS417_28260	0.64	-0.1
6,104,907	+		PS417_28260	0.73	-0.2
6,105,160	+				+0.6
6,105,160	+				-0.0
6,105,160	+				+0.4
6,105,160	+				+0.1
6,105,162	+				+0.4
6,105,222	+				+0.1
6,105,222	+				-2.6